logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002455_01996

You are here: Home > Sequence: MGYG000002455_01996

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides cellulosilyticus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides cellulosilyticus
CAZyme ID MGYG000002455_01996
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
532 MGYG000002455_7|CGC8 58118.47 6.0654
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002455 6974062 Isolate United States North America
Gene Location Start: 320756;  End: 322354  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002455_01996.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 74 457 2.1e-82 0.9446153846153846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.69e-73 42 435 75 466
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 4.05e-33 84 402 9 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 6.74e-22 4 377 9 340
Probable polygalacturonase
PLN03003 PLN03003 5.39e-20 50 377 24 301
Probable polygalacturonase At3g15720
PLN02218 PLN02218 2.49e-19 50 381 68 359
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63669.1 4.02e-163 32 509 29 532
QIK58732.1 4.67e-162 24 509 25 533
QRX62571.1 1.44e-161 26 511 29 538
QIK53315.1 3.76e-161 24 509 25 533
AKD03742.1 4.33e-157 30 514 47 555

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 2.79e-58 43 464 21 429
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 3.28e-47 34 448 29 428
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 3.25e-31 40 442 148 571
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MXN_A 1.40e-15 49 305 21 235
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
6KVH_A 1.61e-13 181 402 84 297
ChainA, endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 2.09e-48 51 457 64 437
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 2.76e-36 42 442 145 564
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
Q949Z1 9.39e-27 19 377 64 373
Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1
P27644 1.30e-21 207 445 23 261
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q7M1E7 7.26e-21 51 471 60 405
Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000254 0.998951 0.000275 0.000158 0.000160 0.000151

TMHMM  Annotations      download full data without filtering help

start end
7 26