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CAZyme Information: MGYG000002458_01069

You are here: Home > Sequence: MGYG000002458_01069

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Yersinia aleksiciae
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia aleksiciae
CAZyme ID MGYG000002458_01069
CAZy Family PL38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
433 MGYG000002458_3|CGC3 48667.4 9.356
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002458 4525402 Isolate Finland Europe
Gene Location Start: 274109;  End: 275410  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002458_01069.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 90 369 2.5e-111 0.996415770609319

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 6.85e-101 89 369 1 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
PRK00325 algL 1.70e-04 263 365 194 293
polysaccharide lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AKP35291.1 0.0 4 433 1 430
QKJ05333.1 1.98e-270 27 431 1 405
QGR65793.1 2.11e-251 1 431 1 440
VDZ56810.1 2.11e-251 1 431 1 440
QGR70810.1 2.11e-251 1 431 1 440

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3NFV_A 4.06e-67 71 374 29 333
Crystalstructure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.997603 0.001920 0.000028 0.000009 0.000005 0.000452

TMHMM  Annotations      download full data without filtering help

start end
12 34