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CAZyme Information: MGYG000002463_03842

You are here: Home > Sequence: MGYG000002463_03842

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas aeruginosa
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
CAZyme ID MGYG000002463_03842
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
442 MGYG000002463_25|CGC1 50071.33 5.7893
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002463 6750396 Isolate Brazil South America
Gene Location Start: 10134;  End: 11462  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002463_03842.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 88 394 1.5e-37 0.7238979118329466

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3664 XynB 2.76e-167 23 442 8 424
Beta-xylosidase [Carbohydrate transport and metabolism].
pfam01229 Glyco_hydro_39 4.29e-08 136 396 120 384
Glycosyl hydrolases family 39.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGY69805.1 0.0 1 442 1 442
QDY00834.1 0.0 1 442 1 442
ARI98072.1 0.0 1 442 1 442
ASD03991.1 0.0 1 442 1 442
AOX27121.1 0.0 1 442 1 442

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 1.05e-314 30 442 4 416
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 1.49e-314 31 442 5 416
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]
4EKJ_A 2.15e-06 68 369 51 372
ChainA, Beta-xylosidase [Caulobacter vibrioides]
4M29_A 3.76e-06 68 369 51 372
Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.006475 0.992118 0.000606 0.000344 0.000217 0.000215

TMHMM  Annotations      download full data without filtering help

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