Species | Pseudomonas aeruginosa | |||||||||||
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Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa | |||||||||||
CAZyme ID | MGYG000002463_05665 | |||||||||||
CAZy Family | GH23 | |||||||||||
CAZyme Description | Soluble lytic murein transglycosylase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 40018; End: 41946 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH23 | 492 | 619 | 1.3e-28 | 0.7925925925925926 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK11619 | PRK11619 | 4.15e-115 | 4 | 638 | 10 | 644 | lytic murein transglycosylase; Provisional |
cd13401 | Slt70-like | 1.22e-76 | 473 | 621 | 1 | 149 | 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
cd16896 | LT_Slt70-like | 6.18e-48 | 475 | 617 | 1 | 143 | uncharacterized lytic transglycosylase subfamily with similarity to Slt70. Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
COG0741 | MltE | 5.93e-41 | 341 | 633 | 1 | 295 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis]. |
cd00254 | LT-like | 2.13e-34 | 494 | 618 | 2 | 110 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QKQ60658.1 | 0.0 | 1 | 642 | 1 | 642 |
AON06312.1 | 0.0 | 1 | 642 | 1 | 642 |
AON36288.1 | 0.0 | 1 | 642 | 1 | 642 |
AON30284.1 | 0.0 | 1 | 642 | 1 | 642 |
QKR61335.1 | 0.0 | 1 | 642 | 1 | 642 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6FCQ_A | 0.0 | 30 | 642 | 1 | 613 | ChainA, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCR_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCS_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCU_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa] |
5OHU_A | 0.0 | 1 | 642 | 1 | 642 | TheX-ray Structure of Lytic Transglycosylase Slt from Pseudomonas aeruginosa [Pseudomonas aeruginosa] |
6FBT_A | 0.0 | 30 | 639 | 1 | 610 | ChainA, Lytic murein transglycosylase [Pseudomonas aeruginosa] |
6FC4_A | 0.0 | 29 | 642 | 1 | 614 | ChainA, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa] |
1QSA_A | 3.11e-93 | 26 | 638 | 2 | 618 | CrystalStructure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.65 Angstroms Resolution [Escherichia coli],1QTE_A Crystal Structure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.90 A Resolution In Complex With A 1,6- Anhydromurotripeptide [Escherichia coli] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P0AGC3 | 5.81e-94 | 13 | 638 | 18 | 645 | Soluble lytic murein transglycosylase OS=Escherichia coli (strain K12) OX=83333 GN=slt PE=1 SV=1 |
P0AGC4 | 5.81e-94 | 13 | 638 | 18 | 645 | Soluble lytic murein transglycosylase OS=Escherichia coli O157:H7 OX=83334 GN=slt PE=3 SV=1 |
P39434 | 6.91e-91 | 22 | 638 | 25 | 645 | Soluble lytic murein transglycosylase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=slt PE=3 SV=2 |
P44888 | 4.59e-39 | 219 | 630 | 174 | 581 | Putative soluble lytic murein transglycosylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=slt PE=3 SV=1 |
O31608 | 1.70e-14 | 480 | 616 | 62 | 177 | Putative murein lytic transglycosylase YjbJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yjbJ PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000443 | 0.998640 | 0.000300 | 0.000221 | 0.000201 | 0.000180 |
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