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CAZyme Information: MGYG000002467_01844
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Yersinia frederiksenii_C | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia frederiksenii_C | |||||||||||
| CAZyme ID | MGYG000002467_01844 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | Peptidoglycan hydrolase FlgJ | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 159596; End: 160537 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 161 | 295 | 2.1e-35 | 0.9453125 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK05684 | flgJ | 0.0 | 1 | 309 | 1 | 312 | flagellar assembly peptidoglycan hydrolase FlgJ. |
| TIGR02541 | flagell_FlgJ | 1.13e-116 | 10 | 295 | 1 | 294 | flagellar rod assembly protein/muramidase FlgJ. The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring. |
| PRK12712 | flgJ | 2.09e-96 | 11 | 294 | 17 | 342 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
| PRK12709 | flgJ | 8.94e-87 | 11 | 294 | 15 | 319 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
| PRK12713 | flgJ | 5.00e-79 | 10 | 301 | 15 | 333 | flagellar rod assembly protein/muramidase FlgJ; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ATM96322.1 | 4.89e-212 | 1 | 313 | 1 | 313 |
| AJJ20185.1 | 1.10e-208 | 1 | 313 | 1 | 313 |
| VDZ55986.1 | 1.10e-208 | 1 | 313 | 1 | 313 |
| ARB86774.2 | 1.10e-208 | 1 | 313 | 1 | 313 |
| AVL35287.1 | 1.10e-208 | 1 | 313 | 1 | 313 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5DN4_A | 4.37e-70 | 152 | 313 | 6 | 167 | Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
| 5DN5_A | 1.29e-65 | 152 | 295 | 6 | 149 | Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
| 3VWO_A | 1.05e-37 | 163 | 291 | 15 | 143 | Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1] |
| 2ZYC_A | 1.36e-37 | 163 | 291 | 16 | 144 | ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1] |
| 3K3T_A | 1.06e-36 | 163 | 291 | 16 | 144 | E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15931 | 1.23e-125 | 7 | 313 | 8 | 316 | Peptidoglycan hydrolase FlgJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flgJ PE=1 SV=1 |
| P58231 | 3.25e-120 | 1 | 313 | 2 | 313 | Peptidoglycan hydrolase FlgJ OS=Escherichia coli O157:H7 OX=83334 GN=flgJ PE=3 SV=1 |
| P75942 | 4.60e-120 | 1 | 313 | 2 | 313 | Peptidoglycan hydrolase FlgJ OS=Escherichia coli (strain K12) OX=83333 GN=flgJ PE=3 SV=1 |
| Q9I4P4 | 1.18e-49 | 8 | 295 | 15 | 386 | Peptidoglycan hydrolase FlgJ OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=flgJ PE=3 SV=1 |
| Q9KQ15 | 3.41e-41 | 9 | 290 | 9 | 302 | Peptidoglycan hydrolase FlgJ OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=flgJ PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000053 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |