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CAZyme Information: MGYG000002470_03952
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides intestinalis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides intestinalis | |||||||||||
| CAZyme ID | MGYG000002470_03952 | |||||||||||
| CAZy Family | PL13 | |||||||||||
| CAZyme Description | Heparin lyase I | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 122160; End: 123338 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL13 | 23 | 382 | 1.5e-201 | 0.9889807162534435 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14099 | Polysacc_lyase | 2.19e-14 | 51 | 371 | 9 | 201 | Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QDO67520.1 | 8.98e-298 | 1 | 392 | 1 | 392 |
| QUT89934.1 | 1.11e-263 | 1 | 386 | 1 | 386 |
| ALJ58949.1 | 6.17e-261 | 1 | 386 | 1 | 386 |
| AVM56394.1 | 3.48e-240 | 11 | 385 | 10 | 384 |
| ADV43611.1 | 1.59e-237 | 1 | 382 | 1 | 379 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ILR_A | 1.06e-200 | 24 | 382 | 3 | 369 | Structureof Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product [Bacteroides thetaiotaomicron] |
| 3IKW_A | 1.23e-200 | 22 | 382 | 2 | 373 | Structureof Heparinase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron] |
| 3IMN_A | 3.87e-198 | 22 | 382 | 4 | 375 | Crystalstructure of heparin lyase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron],3IN9_A Crystal structure of heparin lyase I complexed with disaccharide heparin [Bacteroides thetaiotaomicron] |
| 3INA_A | 1.28e-196 | 22 | 382 | 4 | 375 | Crystalstructure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q05819 | 8.55e-182 | 22 | 382 | 21 | 381 | Heparin lyase I OS=Pedobacter heparinus OX=984 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000388 | 0.998767 | 0.000270 | 0.000205 | 0.000185 | 0.000172 |