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CAZyme Information: MGYG000002470_04269
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides intestinalis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides intestinalis | |||||||||||
| CAZyme ID | MGYG000002470_04269 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Xylan 1,4-beta-xylosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 48023; End: 50611 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 56 | 300 | 1.9e-68 | 0.9814814814814815 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK15098 | PRK15098 | 7.87e-115 | 1 | 862 | 1 | 765 | beta-glucosidase BglX. |
| PLN03080 | PLN03080 | 1.41e-109 | 20 | 846 | 39 | 769 | Probable beta-xylosidase; Provisional |
| COG1472 | BglX | 6.83e-72 | 25 | 429 | 14 | 389 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam01915 | Glyco_hydro_3_C | 2.63e-50 | 373 | 743 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| pfam00933 | Glyco_hydro_3 | 9.04e-43 | 59 | 330 | 63 | 316 | Glycosyl hydrolase family 3 N terminal domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QDO68367.1 | 0.0 | 1 | 862 | 1 | 862 |
| QUT88841.1 | 0.0 | 1 | 862 | 1 | 862 |
| ALJ60147.1 | 0.0 | 1 | 862 | 1 | 862 |
| AVM57874.1 | 0.0 | 1 | 857 | 1 | 853 |
| AVM52699.1 | 0.0 | 1 | 857 | 1 | 853 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5Z87_A | 4.27e-91 | 59 | 861 | 120 | 784 | ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus] |
| 7VC7_A | 3.15e-84 | 25 | 848 | 17 | 720 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 7VC6_A | 3.15e-84 | 25 | 848 | 17 | 720 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 6R5I_A | 4.47e-73 | 79 | 856 | 83 | 729 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
| 5XXL_A | 5.27e-73 | 59 | 862 | 81 | 752 | Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5EY15 | 0.0 | 10 | 861 | 11 | 861 | Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1 |
| T2KMH0 | 4.22e-94 | 1 | 862 | 1 | 723 | Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1 |
| P33363 | 2.92e-88 | 25 | 850 | 63 | 755 | Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2 |
| Q56078 | 4.05e-88 | 25 | 850 | 63 | 755 | Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2 |
| Q9SGZ5 | 4.18e-87 | 1 | 819 | 1 | 730 | Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000979 | 0.852955 | 0.145261 | 0.000326 | 0.000251 | 0.000219 |