logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002472_01543

You are here: Home > Sequence: MGYG000002472_01543

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lentilactobacillus kefiri
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus; Lentilactobacillus kefiri
CAZyme ID MGYG000002472_01543
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
847 MGYG000002472_1|CGC15 92930.97 9.6802
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002472 2568073 Isolate Italy Europe
Gene Location Start: 1547926;  End: 1550469  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002472_01543.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 126 264 1.7e-17 0.3619489559164733

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam19087 DUF5776 3.14e-19 774 842 1 67
Domain of unknown function (DUF5776). Presumed stalk domain found in bacterial surface proteins forming tandem repeats with high sequence identity. This domain is also associated with other known bacterial surface protein stalks and adhesive domains.
cd04083 CBM35_Lmo2446-like 4.33e-05 474 555 4 86
Carbohydrate Binding Module 35 (CBM35) domains similar to Lmo2446. This family includes carbohydrate binding module 35 (CBM35) domains that are appended to several carbohydrate binding enzymes. Some CBM35 domains belonging to this family are appended to glycoside hydrolase (GH) family domains, including glycoside hydrolase family 31 (GH31), for example the CBM35 domain of Lmo2446, an uncharacterized protein from Listeria monocytogenes EGD-e. These CBM35s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. GH31 has a wide range of hydrolytic activities such as alpha-glucosidase, alpha-xylosidase, 6-alpha-glucosyltransferase, or alpha-1,4-glucan lyase, cleaving a terminal carbohydrate moiety from a substrate that may be a starch or a glycoprotein. Most characterized GH31 enzymes are alpha-glucosidases.
pfam00150 Cellulase 1.31e-04 95 262 67 236
Cellulase (glycosyl hydrolase family 5).
pfam01229 Glyco_hydro_39 4.09e-04 153 335 152 361
Glycosyl hydrolases family 39.
pfam19087 DUF5776 0.004 696 770 9 67
Domain of unknown function (DUF5776). Presumed stalk domain found in bacterial surface proteins forming tandem repeats with high sequence identity. This domain is also associated with other known bacterial surface protein stalks and adhesive domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGV24829.1 0.0 90 847 1 758
QHB51372.1 3.94e-166 2 847 6 814
QHB51375.1 3.92e-162 2 847 4 824
QQE80530.1 1.66e-85 29 632 39 585
QKS44145.1 2.09e-64 36 636 411 948

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5U22_A 1.84e-49 32 451 23 423
Structureof N2152 from Neocallimastix frontalis [Neocallimastix frontalis]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000933 0.803844 0.194453 0.000270 0.000246 0.000223

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002472_01543.