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CAZyme Information: MGYG000002473_00603

You are here: Home > Sequence: MGYG000002473_00603

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis vadensis
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis vadensis
CAZyme ID MGYG000002473_00603
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1348 MGYG000002473_10|CGC1 149984.99 7.0995
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002473 4576885 Isolate not provided not provided
Gene Location Start: 38643;  End: 42689  Strand: -

Full Sequence      Download help

MRRLLFTMLL  LCVLAARGEE  HPVPLDAAWT  LPDGARLTPA  GTLEIQIRPG  KEANRFLTAQ60
RTFDIIPYRG  HDIELVYRLR  AEKVTRPPQD  FTGIKLILSC  RSGHREIVAD  TPRQWNHGDF120
DWREVTIPMS  VPEDARTAKL  MVGLQNSSGL  IEVRSITVRD  LGERPDAEVS  PAPYLPPRGK180
FRRADTIDIA  ATGPTKVQRS  LNGMWKISEL  ETAVKPFPAD  ADRERGIERP  EFDDSGWAEI240
AVPLNWYLKY  PEKQNLREPY  VKGWYRTTFD  LAATELKQRR  VILKFDVIGC  DATLFLNGRE300
VGRHLGDFTA  FELDVTDAAR  PGRNTLAIRV  FTDQGHAANP  EKIHHAYGAQ  WSVKDIKGGI360
WQNVALSLEP  EIRIAGLFVT  PRLAKSAVEV  DYKILNHTGK  TVKTALDFSA  TPAIRQDAGK420
LAGTRRHAVA  LQPGVNTGTV  ELPLSDPVRW  STTNPYLYFL  VCEVKDAEGG  FSRDAVRFGY480
REFAARDGKF  FLNGEEIYLF  GQNIGSKFGG  NGLDEAQEER  NILGILLDYR  NLGYVMTRTS540
HMPILPLALE  IADEIGMMIY  HEWAWSFTTN  LDFEAFERNN  LREIAEFVKA  SYNHPSVCMW600
SLGNEIKHQE  PGIARQLDLQ  YDTVRALDKS  GRPACSFSAM  GSWYSYGTNR  LKTDVIDIHE660
YAGLASPWSR  LPELLARQYE  GELRIYGETG  RLSRPLVAWE  TVGFSWGTHV  TDRNFRRGDI720
GQYADYVNKP  SSWGSPNGIG  FIGCAPLFEA  LTPGFAEWAQ  ALYGRRIYEI  FRLDPNFSGF780
APWFGGNPAA  TLWTQPLFPA  LRNENSLFPR  NLFTGENYRW  RLELVNSNSR  RYRAPQLELA840
LHRTTREAVI  LHTQKLPEIA  PYSRSSVPVA  LTVPAGLRSG  DWQLRVTLRE  ADEIVARNYY900
DLFLSPRPEK  ITGRRPLFVL  DTGAGKNVAA  LETLLDEFGL  ACRRINSAAE  AAADSVLAVP960
PETAEPQTLR  LQDDPAVAAF  LNRGGTLLVL  EQKNIKSILP  GNRSPAPGGN  TFVDVVTPDH1020
PLFAGLDPAR  FDTWNNPDHG  YVAAAAFLPY  SPDALAVRGT  GLGQNGIGGA  VIEGTVGSGR1080
VLLSQLEATA  CYRNDSAAAA  YLRNLLAYAV  GEERWEQAQP  LSVGQSRTFE  VRPETQKPID1140
LAPYANAPFR  DEYENDGKGG  WTDQGSNDFR  MMPVGELTAA  GVRFRIVDPA  RNGGRGCLVL1200
RGSERPGLPA  AVRGIRVHEK  VSRLFFMHTA  AWGNRGFAGA  YRIRYADGKT  VDYKLQGGKN1260
IGDWWRVAML  PEAKVGIICR  NAFGSEVGTF  VAAWRNPRPE  VRVDSFDFLS  AGEAQDGGID1320
WLPSNSPVPV  LVAVTAEKAE  EKDHGQLR1348

Enzyme Prediction      help

No EC number prediction in MGYG000002473_00603.

CAZyme Signature Domains help

Created with Snap6713420226933740447153960667474180887694310111078114512131280192635GH2
Family Start End Evalue family coverage
GH2 192 635 4e-77 0.4867021276595745

CDD Domains      download full data without filtering help

Created with Snap6713420226933740447153960667474180887694310111078114512131280175605ebgA194610LacZ194640PRK10150194608lacZ199370Glyco_hydro_2_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 5.14e-38 175 605 15 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 2.17e-35 194 610 8 411
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 2.58e-30 194 640 8 451
beta-D-glucuronidase; Provisional
PRK09525 lacZ 1.57e-21 194 608 48 465
beta-galactosidase.
pfam02837 Glyco_hydro_2_N 6.22e-12 199 370 2 169
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Created with Snap67134202269337404471539606674741808876943101110781145121312801721342AVM44624.1|GH21721339AVM45809.1|GH21731342AVM45701.1|GH21961339AVM46610.1|GH21671342AVM43171.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44624.1 0.0 172 1342 23 1214
AVM45809.1 0.0 172 1339 25 1216
AVM45701.1 0.0 173 1342 29 1218
AVM46610.1 0.0 196 1339 55 1197
AVM43171.1 0.0 167 1342 20 1216

PDB Hits      download full data without filtering help

Created with Snap67134202269337404471539606674741808876943101110781145121312802256385T98_A2256067CWD_A2266064YPJ_A2216186ED1_A2286106B6L_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5T98_A 8.63e-32 225 638 42 452
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
7CWD_A 8.58e-29 225 606 21 405
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
4YPJ_A 1.12e-28 226 606 28 411
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
6ED1_A 1.47e-24 221 618 37 437
ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_C Chain C, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_D Chain D, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei]
6B6L_A 2.12e-24 228 610 25 410
Thecrystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838],6B6L_B The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838]

Swiss-Prot Hits      download full data without filtering help

Created with Snap6713420226933740447153960667474180887694310111078114512131280233606sp|T2KPJ7|PLH8_FORAG187631sp|Q6LL68|BGAL_PHOPR199605sp|O52847|BGAL_PRIM3200605sp|Q56307|BGAL_THEMA195605sp|A1SWB8|BGAL_PSYIN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KPJ7 4.37e-27 233 606 75 431
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
Q6LL68 2.11e-25 187 631 35 483
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
O52847 1.26e-23 199 605 59 481
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q56307 2.98e-23 200 605 41 441
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
A1SWB8 8.52e-23 195 605 45 460
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000352 0.998512 0.000594 0.000186 0.000167 0.000163

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002473_00603.