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CAZyme Information: MGYG000002473_01358

You are here: Home > Sequence: MGYG000002473_01358

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis vadensis
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis vadensis
CAZyme ID MGYG000002473_01358
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
612 68448.18 8.3932
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002473 4576885 Isolate not provided not provided
Gene Location Start: 4171;  End: 6009  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002473_01358.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 65 256 2.1e-31 0.5104408352668214

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 1.59e-04 32 245 29 270
Glycosyl hydrolases family 39.
COG2723 BglB 0.004 45 177 65 219
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
smart00633 Glyco_10 0.005 61 245 2 193
Glycosyl hydrolase family 10.
COG3693 XynA 0.006 26 176 37 188
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44901.1 0.0 7 612 10 609
AHF90941.1 1.31e-156 23 607 231 825
AVM44885.1 6.97e-82 4 589 3 571
QDU57372.1 5.15e-62 24 598 28 589
BBY51029.1 9.78e-32 7 250 17 280

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 5.60e-10 27 259 107 353
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.005546 0.873653 0.119894 0.000333 0.000278 0.000263

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002473_01358.