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CAZyme Information: MGYG000002473_01522

You are here: Home > Sequence: MGYG000002473_01522

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis vadensis
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis vadensis
CAZyme ID MGYG000002473_01522
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
618 69142.04 9.2117
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002473 4576885 Isolate not provided not provided
Gene Location Start: 20656;  End: 22512  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002473_01522.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 69 212 2.7e-23 0.37587006960556846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3693 XynA 4.85e-07 55 171 65 191
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
smart00633 Glyco_10 1.02e-05 59 171 3 126
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 0.002 28 168 33 164
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 2.29e-146 11 608 12 610
QDU57372.1 1.29e-78 22 592 28 604
AHF90941.1 8.10e-46 21 576 231 814
QXQ15225.1 1.68e-29 32 245 58 291
ABQ89504.1 1.90e-29 7 243 32 279

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 5.51e-11 25 243 22 255
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 5.51e-11 25 243 22 255
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]
5JVK_A 9.91e-10 25 243 107 345
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]
5M0K_A 2.88e-07 56 259 82 290
CRYSTALSTRUCTURE of endo-1,4-beta-xylanase from Cellulomonas flavigena [Cellulomonas flavigena],5M0K_B CRYSTAL STRUCTURE of endo-1,4-beta-xylanase from Cellulomonas flavigena [Cellulomonas flavigena]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000791 0.984995 0.013577 0.000226 0.000192 0.000175

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002473_01522.