CAZyme Information: MGYG000002473_02064

Basic Information

• Species: Victivallis vadensis
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis vadensis
• CAZyme ID: MGYG000002473_02064
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
657	MGYG000002473_74|CGC1	74195.35	8.8095

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002473	4576885	Isolate	not provided	not provided

• Gene Location: Start: 12230; End: 14203 Strand: -

Full Sequence      

MKTILHCLALTACCALSAAPKVDRYGQSAAENWPGKITRDAQMRAELERESAELADVKPD
MERFDRFGGVKTGKPLAATGFFRVQKIDGRWWLVTPEGNPFYLKGVDAVPYTERGYFTAA
RDSGGTIRKAFTQAAPDPAKYLEAWSKDKKLVNFLAANLYKKYGPDFRERWMELTEKRLR
SWGFNSAAKWNNPFHFDRLPFLHDEQLRVKRFDRFIDPYDPGFEAAAETQVKAMCAKLRG
NPYLIGYQLENENGWGRNAPAILLRDSSGKLAAKRALLEYLAERNGGDPGKFFDRSGAPI
ETLMTETLATAAVPPELLDGFIVQASRRYHEILRGLVKKYDPDHLFLGASHCSSQSVEWI
DGGRESVDLIALHEYDLDSRWIHGTLAGKLREWDKPFAVLEFSFTNHRRGFACGSSTVVK
TEADRGTAFRIYTEKMAADPLCVGTGYFILYDQPVTSRGHDAEAYNFGLIDVTDRPYREM
LAGVKAANARLFDVHAGKLEPIPMQPLRAVKRSLREFLPESVGAVTFDSSNPQFHHNRLD
RVRFGSNARFGVPLAVGTIDAGKPDGFEKLEFYVFLWKTEKNRNLSDWFQLEESADNVTF
SPAPAVFRLHRDGPFREYVMAPQALKPGTRFVRLSFVLNDPAAPWATSLAEVKVERR

Enzyme Prediction     

No EC number prediction in MGYG000002473_02064.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	22	492	1.2e-78	0.7718223583460949

CDD Domains     

MGYG000002473_02064 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM46385.1	1.67e-149	1	656	1	669
QRO01254.1	4.52e-97	22	513	217	711
BBI31951.1	2.44e-80	22	495	610	1100
CCW35847.1	3.69e-68	22	497	198	695
AIE85408.1	1.00e-60	22	515	193	701

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4BQ2_A	5.13e-49	22	497	204	748	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	1.29e-48	22	497	204	748	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A	5.42e-45	22	493	223	760	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5Z6P_A	2.71e-43	22	492	223	759	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
5T3B_A	5.98e-12	61	494	80	475	ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	2.46e-46	22	492	432	949	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001325	0.566181	0.431724	0.000257	0.000267	0.000225

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002473_02064.