CAZyme Information: MGYG000002473_02715

Basic Information

• Species: Victivallis vadensis
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis vadensis
• CAZyme ID: MGYG000002473_02715
• CAZy Family: GH42
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1025		114623.75	6.9978

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002473	4576885	Isolate	not provided	not provided

• Gene Location: Start: 4133; End: 7210 Strand: +

Full Sequence      

MKKKFLLPALLLLLPAGAADVHKPSAYSLELSEGLKPTEKIFPLGMLGGSRFTFLPQLGF
NFTEIGHCCYSFKDTGKCSCSFPPNRSNGLYFVAIWAAHSMWYGGNTATHGPVIRPVDEN
GKAQEGPWIDYLAPTMRDYIRACVKASVEGSVNEKPKRNIMLWNIDNEWEPVLNYSPLAM
AGFQRELEHIYGGDIGKLNEVWKTKYRSFCEILPPKGEEYLEKPAAWLAWHDYSENTFVD
FIGSYLGWVREFDPEHRPAVLKSTQCSSIEMNYIVRSHMANLAKLADRTRRTSDGWIGID
MYGNTDRNAYETSYIYNCIRPTATQQAAGEPEGRIFFAETNNHAGPGFQFAATYWRTLAH
GMRGVDFFVLGRYKSNWDNLTFSFIDGYDGQPRDRMFYASRWANMIHRSEEFWHDALPAK
NVPKIAILMPQRDVLLSMETNRSRWDYSVNNRLNVFTRLRDAGYWVDVLPYTKLTDDYLA
RYRALILVSAEHLSAEECAAIRRFTANGGVVMADMMPGYYDEKHRVTQGLDELLGVRLEG
VYSGIHFSPDDVWYGTEHGFLIRGDGRINVKLAGAELLNARDVACNAKSAWVTCNRYGKG
RVYWFNTRIGVLRAENAPESDVTTFLTGFLKRAGVAPAYSAAQMENLRIEHPLTDGRGNW
LLAAGVMNRLPWPGGKVTLKMPPEFKLPARVWFGAAEENMLHPIPAELRADGTLELTLPE
IRSAGMIYLFNDHAPMLSLAVTNAERHAANDPNTPMFEPGKSCEVVVSPVDFSPGSEGRR
IALDVEPGWKVTPVSQPVGTAPARFTVTPPAELPEQALPNMIYPVVATMSDDGGRIAVAH
LAAMLRFDPVRHTILLTDNADNGSEVAPIAIRTGAEYRFLTPKPLRKDQQIRDPRDPGAT
GGKPALFQGVLGDWNQPADVLFVNLPEATVEVDLKSVYRLEHMELGAGSKPNLKGVEICF
SRDGKTFSDPKKLDVAGLKLKLAGFELPEQPEARFVRFRLQFSAPEATFGEIKLRGRVID
GGGTK

Enzyme Prediction     

No EC number prediction in MGYG000002473_02715.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH42	112	380	8.6e-17	0.7088948787061995

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd03143	A4_beta-galactosidase_middle_domain	1.34e-08	426	540	2	112	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam02449	Glyco_hydro_42	2.13e-08	112	255	81	230	Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
COG1874	GanA	2.91e-04	112	603	103	584	Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam08532	Glyco_hydro_42M	4.57e-04	456	636	36	207	Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM46287.1	1.82e-248	1	1019	1	1019
AWI09958.1	4.11e-137	18	1017	42	1104
ACQ81541.1	1.14e-10	134	663	136	640
AZP15131.1	2.55e-10	97	680	87	659
BCL17927.1	5.91e-10	160	661	140	632

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000532	0.998398	0.000399	0.000218	0.000208	0.000201

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002473_02715.