CAZyme Information: MGYG000002476_02405

Basic Information

• Species: Yersinia pestis
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia pestis
• CAZyme ID: MGYG000002476_02405
• CAZy Family: GH104
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
618		67284.29	5.0665

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002476	4935125	Isolate	Russia	Europe

• Gene Location: Start: 2525056; End: 2526912 Strand: -

Full Sequence      

MSETIDSLLVSLGLETDAKSFQKANDAVKGIKDGILQLAAAAGTGIGLKALTTDLSASVL
EMDRLSKITNFTVKQIDGLRYAMRSLGLSPDAANQIVQKIPDLQQRATQGELGDKAYWNG
LFNPAEFALKTGMDSLTYLINAYEKMNNDQRRNLRNGISAGDNDPFTRLLEGGIKKFNTS
LKNFEALYKPLDPKLIDSANAFNKEMATLATNFENLARLMGRDLLPIINALLGSINQFIN
ENPEVSKAILTAAGVVGTAGALKFVGGILPRAGGKPPVSVAGERGWTSRLLFNPVTIGVT
AALTPGNIFTSADDAKAMSNPDSLKRQNWAKNNPDIPYLDDTDGLNRPANYPNVRQYPEV
LANTGETANYSPLLYDTRDDTQQLNQFTPAANNPNSPEIFYQKGNNNLSHLVDHTNVRQY
LDMLAKAEGTAGYANSGYNTLFGGDQFYDISDHPRKLIEFKQPDGTPNKTSAAGRYQFTR
DSWDDAAKALNLTDFSPRSQDIAALFLIQRAGQLENVVNGNFADATGELGGVWASLPSSN
YAQPKRSWEDIQGYSDRQITPVQPMAASSPRGDVRLEQYNTISVGTVGGDADSIRNGILQ
ATTQLAQQARDLMYTEHY

Enzyme Prediction     

No EC number prediction in MGYG000002476_02405.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH104	414	552	2.9e-42	0.9310344827586207

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00736	lambda_lys-like	5.65e-56	416	554	2	135	Bacteriophage lambda lysozyme and similar proteins. Lysozyme from bacteriophage lambda hydrolyzes the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), as do other lysozymes. However, unlike other lysozymes, bacteriophage lambda does not produce a reducing end upon cleavage of the peptidoglycan, but rather uses the 6-OH of the same MurNAc residue to produce a 1,6-anhydromuramic acid terminal residue and is therefore a lytic transglycosylase. An identical 1,6-anhydro bond is formed in bacterial peptidoglycans by the action of the lytic transglycosylases of E. coli, though they differ structurally.
COG4678	COG4678	1.49e-30	405	554	19	170	Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: prophages, transposons].
pfam00959	Phage_lysozyme	1.33e-05	438	519	1	84	Phage lysozyme. This family includes lambda phage lysozyme and E. coli endolysin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ABS45940.1	0.0	1	618	13	630
AJK15448.1	0.0	1	618	1	618
QAX78384.1	0.0	1	618	1	554
AHM74501.1	0.0	1	618	1	554
ATM95504.1	0.0	1	618	1	553

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1D9U_A	3.44e-23	411	543	1	134	ChainA, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],1D9U_B Chain B, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],3D3D_A Chain A, Lysozyme [Lambdavirus lambda],3D3D_B Chain B, Lysozyme [Lambdavirus lambda]
1AM7_A	1.88e-20	411	543	1	134	ChainA, LYSOZYME [Lambdavirus lambda],1AM7_B Chain B, LYSOZYME [Lambdavirus lambda],1AM7_C Chain C, LYSOZYME [Lambdavirus lambda]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P03706	2.10e-22	411	543	1	134	Endolysin OS=Escherichia phage lambda OX=10710 GN=R PE=1 SV=1
P51771	6.86e-18	414	551	7	153	Endolysin OS=Escherichia phage P2 OX=10679 GN=K PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000044	0.000003	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002476_02405.