dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002476_03335

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Basic Information help

Species

Yersinia pestis

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia pestis

CAZyme ID

MGYG000002476_03335

CAZy Family

AA10

CAZyme Description

GlcNAc-binding protein A

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
534	MGYG000002476_3\|CGC29	58544.54	5.8069

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002476	4935125	Isolate	Russia	Europe

Gene Location

Start: 3549193; End: 3550797 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002476_03335.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
AA10	38	242	4.8e-43	0.9943820224719101

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3397	COG3397	1.45e-134	7	349	1	308	Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only].
pfam03067	LPMO_10	1.72e-49	38	241	1	186	Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.
cd21177	LPMO_AA10	4.43e-49	38	242	1	180	lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 10 (AA10). AA10 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs), which may act on chitin or cellulose. The family used to be called CBM33. Activities in this family include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54), lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56), lytic chitin monooxygenase (EC 1.14.99.53), and lytic xylan monooxygenase/xylan oxidase (glycosidic bond-cleaving) (EC 1.14.99.-). Also included are viral chitin-binding glycoproteins such as fusolin and spheroidin-like proteins.
cd21178	Fusolin-like	7.67e-39	38	243	1	227	fusolin and similar proteins. Fusolin is a protein found in spindles of insect poxviruses that resembles the lytic polysaccharide monooxygenases of chitinovorous bacteria and may function to disrupt the chitin-rich peritrophic matrix that protects insects against oral infections. Thus, it is a component of the virus occlusion bodies (which are large proteinaceous polyhedra) that protect the virus from the outside environment for extended periods until they are ingested by insect larvae.
PHA03387	gp37	5.29e-32	21	241	5	248	spherodin-like protein; Provisional

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
ABG17199.1	1	534	1	534
ADE65745.1	1	534	1	534
AAS60972.1	1	534	1	534
AYW94701.1	1	534	1	534
QFR71593.1	1	534	1	534

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4YN2_A	1.70e-20	38	249	1	236	THEATOMIC STRUCTURE OF WISEANA SPP ENTOMOPOXVIRUS (WSEPV) FUSOLIN SPINDLES [unidentified entomopoxvirus]
4OY7_A	3.87e-20	38	246	1	196	Structureof cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_B Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_C Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_D Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_E Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_F Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_G Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_H Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)]
4YN1_A	5.57e-20	38	249	1	239	THEATOMIC STRUCTURE OF ANOMALA CUPREA ENTOMOPOXVIRUS (ACEPV) FUSOLIN SPINDLES [Anomala cuprea entomopoxvirus]
5FJQ_A	6.00e-17	109	243	57	179	Structuraland functional analysis of a lytic polysaccharide monooxygenase important for efficient utilization of chitin in Cellvibrio japonicus [Cellvibrio japonicus],5FJQ_B Structural and functional analysis of a lytic polysaccharide monooxygenase important for efficient utilization of chitin in Cellvibrio japonicus [Cellvibrio japonicus],5FJQ_C Structural and functional analysis of a lytic polysaccharide monooxygenase important for efficient utilization of chitin in Cellvibrio japonicus [Cellvibrio japonicus]
4X27_A	3.26e-16	38	241	1	231	Structuralbasis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Copper) [Entomopoxvirinae],4X29_A Structural basis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Zinc) [Entomopoxvirinae]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q02I11	5.29e-28	21	516	10	381	Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=cpbD PE=1 SV=1
Q9I589	2.47e-27	21	516	10	381	Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=cbpD PE=1 SV=1
A3KKC4	6.84e-21	29	247	26	231	Lytic cellulose monooxygenase OS=Streptomyces ambofaciens (strain ATCC 23877 / 3486 / DSM 40053 / JCM 4204 / NBRC 12836 / NRRL B-2516) OX=278992 GN=SAM23877_1271 PE=1 SV=1
Q65328	1.71e-17	26	241	7	246	Spheroidin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=SLP PE=2 SV=1
P23061	2.18e-17	18	249	1	260	Spindolin OS=Choristoneura biennis entomopoxvirus OX=10288 GN=SPH PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.039135	0.956627	0.001091	0.002273	0.000451	0.000403

TMHMM Annotations help

There is no transmembrane helices in MGYG000002476_03335.