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CAZyme Information: MGYG000002476_04236

You are here: Home > Sequence: MGYG000002476_04236

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Yersinia pestis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia pestis
CAZyme ID MGYG000002476_04236
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
159 MGYG000002476_3|CGC44 17262.84 8.0143
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002476 4935125 Isolate Russia Europe
Gene Location Start: 4580007;  End: 4580486  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002476_04236.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 28 145 1.3e-21 0.9274193548387096

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 1.28e-17 26 145 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 2.41e-05 27 129 14 126
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AJJ04381.1 3.14e-109 1 159 1 159
VEE69887.1 3.14e-109 1 159 1 159
AJJ68813.1 3.14e-109 1 159 1 159
QET00104.1 3.14e-109 1 159 1 159
VEA96819.1 3.14e-109 1 159 1 159

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2JD9_A 3.12e-80 20 158 6 144
Structureof a pectin binding carbohydrate binding module determined in an orthorhombic crystal form. [Yersinia enterocolitica],2JDA_A Structure of a pectin binding carbohydrate binding module determined in an monoclinic crystal form. [Yersinia enterocolitica],2JDA_B Structure of a pectin binding carbohydrate binding module determined in an monoclinic crystal form. [Yersinia enterocolitica]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000869 0.816175 0.182071 0.000354 0.000266 0.000235

TMHMM  Annotations      download full data without filtering help

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