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CAZyme Information: MGYG000002477_03485

You are here: Home > Sequence: MGYG000002477_03485

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter_A amalonaticus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A amalonaticus
CAZyme ID MGYG000002477_03485
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
341 37525.61 6.1092
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002477 5083867 Isolate United States North America
Gene Location Start: 3488107;  End: 3489132  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.52

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 56 278 2e-53 0.9537037037037037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05337 PRK05337 0.0 1 335 1 337
beta-hexosaminidase; Provisional
pfam00933 Glyco_hydro_3 2.64e-127 4 303 10 316
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 6.50e-122 1 341 5 355
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPB34083.1 1.18e-249 1 341 1 341
QZA38245.1 1.18e-249 1 341 1 341
QIO39418.1 1.18e-249 1 341 1 341
AUZ66025.1 1.18e-249 1 341 1 341
AMG54624.1 1.18e-249 1 341 1 341

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4GVF_A 5.02e-236 1 341 1 341
Crystalstructure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVF_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
4GVI_A 2.90e-235 1 341 1 341
Crystalstructure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVI_B Crystal structure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
1Y65_A 3.84e-126 1 337 3 333
Crystalstructure of beta-hexosaminidase from Vibrio cholerae in complex with N-acetyl-D-glucosamine to a resolution of 1.85 [Vibrio cholerae]
2OXN_A 5.09e-126 1 336 1 330
Vibriocholerae family 3 glycoside hydrolase (NagZ) in complex with PUGNAc [Vibrio cholerae]
3GS6_A 2.06e-125 1 336 1 330
ChainA, Beta-hexosaminidase [Vibrio cholerae],3GSM_A Chain A, Beta-hexosaminidase [Vibrio cholerae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B5RB93 2.04e-235 1 341 1 341
Beta-hexosaminidase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=nagZ PE=3 SV=1
B5F8E5 2.04e-235 1 341 1 341
Beta-hexosaminidase OS=Salmonella agona (strain SL483) OX=454166 GN=nagZ PE=3 SV=1
B5FK98 2.04e-235 1 341 1 341
Beta-hexosaminidase OS=Salmonella dublin (strain CT_02021853) OX=439851 GN=nagZ PE=3 SV=1
B5QXC7 2.04e-235 1 341 1 341
Beta-hexosaminidase OS=Salmonella enteritidis PT4 (strain P125109) OX=550537 GN=nagZ PE=3 SV=1
A9N5J6 2.04e-235 1 341 1 341
Beta-hexosaminidase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) OX=1016998 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000070 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002477_03485.