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CAZyme Information: MGYG000002478_00143

You are here: Home > Sequence: MGYG000002478_00143

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola dorei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei
CAZyme ID MGYG000002478_00143
CAZy Family PL40
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
939 MGYG000002478_1|CGC7 106416.7 7.128
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002478 5444912 Isolate Finland Europe
Gene Location Start: 215087;  End: 217906  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002478_00143.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL40 7 930 6.8e-212 0.9507445589919816

CDD Domains      help

MGYG000002478_00143 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALA72172.1 0.0 1 939 1 939
AII66329.1 0.0 1 939 1 939
QJR54171.1 0.0 1 939 1 939
QJR61031.1 0.0 1 939 1 939
AND18151.1 0.0 1 939 1 939

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA3 2.16e-35 32 888 25 794
Endo-acting ulvan lyase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21990 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000326 0.998998 0.000216 0.000158 0.000149 0.000142

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002478_00143.