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CAZyme Information: MGYG000002478_00152

You are here: Home > Sequence: MGYG000002478_00152

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola dorei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei
CAZyme ID MGYG000002478_00152
CAZy Family CBM6
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
529 MGYG000002478_1|CGC7 60202.48 6.3234
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002478 5444912 Isolate Finland Europe
Gene Location Start: 233315;  End: 234904  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002478_00152.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 1.04e-15 74 290 36 264
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY39805.1 3.04e-117 7 373 14 375
ABR37862.1 3.04e-117 7 373 14 375
QUT56879.1 3.04e-117 7 373 14 375
QUR43442.1 8.17e-115 19 380 395 753
QRQ56531.1 2.16e-114 19 380 395 753

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000317 0.999048 0.000163 0.000150 0.000137 0.000135

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002478_00152.