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CAZyme Information: MGYG000002478_00375

You are here: Home > Sequence: MGYG000002478_00375

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola dorei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei
CAZyme ID MGYG000002478_00375
CAZy Family GH109
CAZyme Description Glycosyl hydrolase family 109 protein 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
471 MGYG000002478_1|CGC12 53531.06 5.7631
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002478 5444912 Isolate Finland Europe
Gene Location Start: 558453;  End: 559868  Strand: +

Full Sequence      Download help

MIKNLSTFFV  GIALLCLAGC  TPIPKETTAT  KEYTPLEVPV  PERPAGQQDV  IELITPKLDT60
VRVGFIGLGM  RGPSAVERWT  HIPGTKIVAL  CDLLPENAEK  AQKIVTNAGM  EAPALYSGSE120
DAWKQLCERN  DIDLVYIATD  WKHHAEMGIY  AMEHGKHAAI  EVPAAMSLDE  IWALINTSEK180
TRKHCMQLEN  CVYDFFELTT  LNMAQKGLFG  EVLHVEGSYI  HNLEEFWPYY  WNNWRLDYNR240
EFRGDIYATH  GLGPACQLLN  IHRGDRMKTL  VAMDTKAVTG  PELVKQYQKE  EAPDFQNGDH300
TMTFIRTENG  KTIHIQHDVM  NPRPYSRMYQ  LTGTKGFANK  YPIEQYCFRP  DQIDSTSIPD360
HENLSMHSAV  PEKVKETLMS  QYKHPIHQEL  EETAKKIGGH  GGMDFIMDYR  LVYCLRNGLP420
LDMDVYDLAE  WCCMADLTRL  SIENGNAPVA  VPDFTRGNWN  KVDGYHHAFA  Q471

Enzyme Prediction      help

No EC number prediction in MGYG000002478_00375.

CAZyme Signature Domains help

Created with Snap2347709411714116418821123525928230632935337640042344757461GH109
Family Start End Evalue family coverage
GH109 57 461 6.4e-168 0.9924812030075187

CDD Domains      download full data without filtering help

Created with Snap2347709411714116418821123525928230632935337640042344760362MviM61186GFO_IDH_MocA61157COG409159235PRK11579
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0673 MviM 6.33e-21 60 362 3 281
Predicted dehydrogenase [General function prediction only].
pfam01408 GFO_IDH_MocA 7.87e-12 61 186 1 117
Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
COG4091 COG4091 9.66e-08 61 157 18 128
Predicted homoserine dehydrogenase, contains C-terminal SAF domain [Amino acid transport and metabolism].
PRK11579 PRK11579 0.001 59 235 3 164
putative oxidoreductase; Provisional

CAZyme Hits      help

Created with Snap234770941171411641882112352592823063293533764004234471471QJR53963.1|GH1091471QJR61240.1|GH1091471ALA72374.1|GH1091471AII66549.1|GH1091471AND18351.1|GH109
Hit ID E-Value Query Start Query End Hit Start Hit End
QJR53963.1 0.0 1 471 1 471
QJR61240.1 0.0 1 471 1 471
ALA72374.1 0.0 1 471 1 471
AII66549.1 0.0 1 471 1 471
AND18351.1 0.0 1 471 1 471

PDB Hits      download full data without filtering help

Created with Snap23477094117141164188211235259282306329353376400423447394596T2B_A614622IXA_A404241OFG_A404241RYD_A404241H6A_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6T2B_A 2.23e-89 39 459 21 438
Glycosidehydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_B Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_C Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_D Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila]
2IXA_A 6.17e-65 61 462 21 434
A-zyme,N-acetylgalactosaminidase [Elizabethkingia meningoseptica],2IXB_A Crystal structure of N-ACETYLGALACTOSAMINIDASE in complex with GalNAC [Elizabethkingia meningoseptica]
1OFG_A 8.93e-09 40 424 10 372
ChainA, Glucose-fructose Oxidoreductase [Zymomonas mobilis],1OFG_B Chain B, Glucose-fructose Oxidoreductase [Zymomonas mobilis],1OFG_C Chain C, Glucose-fructose Oxidoreductase [Zymomonas mobilis],1OFG_D Chain D, Glucose-fructose Oxidoreductase [Zymomonas mobilis],1OFG_E Chain E, Glucose-fructose Oxidoreductase [Zymomonas mobilis],1OFG_F Chain F, Glucose-fructose Oxidoreductase [Zymomonas mobilis]
1RYD_A 9.11e-09 40 424 16 378
ChainA, glucose-fructose oxidoreductase [Zymomonas mobilis],1RYD_B Chain B, glucose-fructose oxidoreductase [Zymomonas mobilis],1RYE_A Chain A, glucose-fructose oxidoreductase [Zymomonas mobilis],1RYE_B Chain B, glucose-fructose oxidoreductase [Zymomonas mobilis],1RYE_C Chain C, glucose-fructose oxidoreductase [Zymomonas mobilis],1RYE_D Chain D, glucose-fructose oxidoreductase [Zymomonas mobilis]
1H6A_A 1.03e-08 40 424 62 424
ChainA, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6A_B Chain B, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6B_A Chain A, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6B_B Chain B, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6C_A Chain A, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6C_B Chain B, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_A Chain A, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_B Chain B, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_C Chain C, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_D Chain D, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_E Chain E, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_F Chain F, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_G Chain G, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_H Chain H, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_I Chain I, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_J Chain J, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_K Chain K, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis],1H6D_L Chain L, PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE [Zymomonas mobilis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap234770941171411641882112352592823063293533764004234471471sp|A6KX96|G1091_PHOV81471sp|Q89ZX8|G1091_BACTN1471sp|Q5LGZ0|G1091_BACFN1471sp|P0C863|G1091_BACFR3471sp|Q7MWF4|GH109_PORGI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A6KX96 0.0 1 471 1 471
Glycosyl hydrolase family 109 protein 1 OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=BVU_0340 PE=3 SV=1
Q89ZX8 1.86e-275 1 471 1 467
Glycosyl hydrolase family 109 protein 1 OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=BT_4243 PE=3 SV=1
Q5LGZ0 2.62e-272 1 471 1 464
Glycosyl hydrolase family 109 protein 1 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=BF0853 PE=1 SV=1
P0C863 2.62e-272 1 471 1 464
Glycosyl hydrolase family 109 protein 1 OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=BF0931 PE=3 SV=1
Q7MWF4 4.57e-260 3 471 4 468
Glycosyl hydrolase family 109 protein OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=PG_0664 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000048 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002478_00375.