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CAZyme Information: MGYG000002478_00431

You are here: Home > Sequence: MGYG000002478_00431

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola dorei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei
CAZyme ID MGYG000002478_00431
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
892 MGYG000002478_1|CGC14 101374.85 6.6437
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002478 5444912 Isolate Finland Europe
Gene Location Start: 631506;  End: 634184  Strand: +

Full Sequence      Download help

MKQNILFYLI  ALLFFPLYEM  QAAHQPEFST  AGFYELANSG  REVYSMNPAW  RFHKGAATGA60
EATDFNDRNW  KMVSLPDGIE  YVPTEASGCI  NYQGEVWYRK  HFTPADELKG  KKLFLHFEAI120
MGKSKVFVNG  NLLTEHFGGY  LPVVVDVTDA  LNWETDNVIA  VWADNSNDPS  YPPGKAQDVL180
DYTYFGGIYR  DCWLIAHRPV  FITDPNFENE  MASGGLFVSY  DKVSDTSAEI  ILKAHIRNDS240
KKNFKGVVEY  ELQQPDGTQA  AFLNDVIQVR  PGKAVTSKDK  IMLKSPLLWS  PETPTLYNLI300
VRIRDNEGNV  VDGYRRRIGI  RSVEFKGKDG  FWLNGKPYPS  PLIGANRHQD  FAVVGNAVAN360
SIHWRDAKKL  RDAGMKVIRN  AHCPQDPAFM  DACDELGLFV  IVNTPGWQFW  NDAPEFAQRV420
YSDIRNLVRR  DRNHPCVWLW  EPILNETWYP  ADFAQNTLDI  VNQEYPYPYC  YSGCDSEARG480
HEVYPVLFTH  PANADKDWAI  KSLDPKITYF  TREWGDNVDD  WNSHNSPSRV  ARNWGEQAML540
IQAQHYAAPR  YPFTCYDVLC  RTPRQHVGGC  LWHSFDHQRG  YHPDPFYGGV  MDVFRQPKYA600
YYMFKAQRSP  EKQDRLFETG  PMVHIAHEMT  PFSPKDVTVY  SNCDEVRLTY  NKGGKTWTYT660
KPATKEGMPS  PVITFKDIYD  FMIDKNMSMR  KKKQDEVFLL  AEGIIDGKVV  ATHEVRPARR720
PEKLLLWVDN  ENTDLKADGS  DFVTVVAAIA  DKNGNIKRLN  NYYVKFHVEG  EGRILGGANI780
LANPAPVKWG  TAPVLIQSTL  KPGKIKITAS  VLFEGSQMPA  SAVLELESKP  AAHPLIYTES840
EAALIPMSSD  SPFGQSAAKS  ASELEQERLL  KERNAQRLKE  VEKQQADFGE  KK892

Enzyme Prediction      help

No EC number prediction in MGYG000002478_00431.

CAZyme Signature Domains help

Created with Snap448913317822326731235640144649053557962466971375880284734613GH2
Family Start End Evalue family coverage
GH2 34 613 2.4e-91 0.6263297872340425

CDD Domains      download full data without filtering help

Created with Snap448913317822326731235640144649053557962466971375880284735621LacZ41446PRK1015081453ebgA81440lacZ216321Glyco_hydro_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 5.88e-52 35 621 4 555
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 3.04e-42 41 446 10 417
beta-D-glucuronidase; Provisional
PRK10340 ebgA 1.80e-36 81 453 103 456
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 3.17e-24 81 440 114 457
beta-galactosidase.
pfam00703 Glyco_hydro_2 4.61e-18 216 321 6 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap44891331782232673123564014464905355796246697137588028471892AII66602.1|GH21892QJR53911.1|GH21892QJR61291.1|GH21892ALA72419.1|GH21892QJR74048.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
AII66602.1 0.0 1 892 1 892
QJR53911.1 0.0 1 892 1 892
QJR61291.1 0.0 1 892 1 892
ALA72419.1 0.0 1 892 1 892
QJR74048.1 0.0 1 892 1 892

PDB Hits      download full data without filtering help

Created with Snap4489133178223267312356401446490535579624669713758802847274405UJ6_A414406D50_A414406D8G_A368096HPD_A458105T98_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5UJ6_A 7.19e-61 27 440 11 413
CrystalStructure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],5UJ6_B Crystal Structure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],6NZG_A Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis],6NZG_B Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis]
6D50_A 2.95e-59 41 440 33 421
Bacteroidesuniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii],6D50_B Bacteroides uniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii]
6D8G_A 8.09e-58 41 440 33 421
D341AD367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2 [Bacteroides uniformis str. 3978 T3 ii],6D8G_B D341A D367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2 [Bacteroides uniformis str. 3978 T3 ii]
6HPD_A 4.44e-56 36 809 30 790
Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901]
5T98_A 5.41e-56 45 810 29 807
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap448913317822326731235640144649053557962466971375880284740809sp|P77989|BGAL_THEP341776sp|P26257|BGAL_THETU39810sp|A7LXS9|BGH2A_BACO136809sp|T2KN75|PLH17_FORAG29651sp|T2KPJ7|PLH8_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 2.74e-104 40 809 2 723
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
P26257 3.29e-63 41 776 2 706
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1
A7LXS9 7.02e-58 39 810 40 835
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
T2KN75 2.31e-55 36 809 21 781
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
T2KPJ7 3.93e-47 29 651 39 668
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000244 0.999089 0.000179 0.000162 0.000146 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002478_00431.