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CAZyme Information: MGYG000002478_00539
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola dorei | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei | |||||||||||
| CAZyme ID | MGYG000002478_00539 | |||||||||||
| CAZy Family | PL42 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 784573; End: 785811 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL42 | 21 | 313 | 1.1e-125 | 0.9966216216216216 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam15892 | BNR_4 | 4.69e-120 | 38 | 300 | 1 | 272 | BNR repeat-containing family member. BNR_4 is a family which carries the unique sequence motif SxDxGxTW which is so characteristic of the repeats of the BNR family, pfam02012. It is unclear whether or not this unit is repeated throughout the sequences of this family, but if it is then the family is likely to be bacterial neuraminidase. |
| cd15482 | Sialidase_non-viral | 0.010 | 147 | 350 | 39 | 232 | Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AII66702.1 | 0.0 | 1 | 412 | 1 | 412 |
| QUT85916.1 | 0.0 | 1 | 412 | 1 | 412 |
| QJR61378.1 | 0.0 | 1 | 412 | 13 | 424 |
| ALA72499.1 | 0.0 | 1 | 412 | 13 | 424 |
| QJR74128.1 | 0.0 | 1 | 412 | 13 | 424 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5MUM_A | 2.97e-246 | 9 | 412 | 27 | 430 | GlycosideHydrolase BACINT_00347 [Bacteroides intestinalis DSM 17393] |
| 5MVH_A | 3.88e-244 | 5 | 412 | 18 | 425 | GlycosideHydrolase BACCELL_00856 [Bacteroides cellulosilyticus DSM 14838] |
| 5MUK_A | 7.82e-244 | 5 | 411 | 18 | 424 | GlycosideHydrolase BT3686 [Bacteroides thetaiotaomicron VPI-5482],5MUL_A Glycoside Hydrolase BT3686 bound to Glucuronic Acid [Bacteroides thetaiotaomicron VPI-5482] |
| 4IRT_A | 2.55e-238 | 7 | 411 | 3 | 407 | Crystalstructure of a putative neuraminidase (BACOVA_03493) from Bacteroides ovatus ATCC 8483 at 1.74 A resolution [Bacteroides ovatus ATCC 8483] |
| 7ESK_A | 1.11e-37 | 19 | 270 | 20 | 291 | ChainA, L-Rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum],7ESM_A Chain A, L-rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000063 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |