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CAZyme Information: MGYG000002478_01376

You are here: Home > Sequence: MGYG000002478_01376

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola dorei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei
CAZyme ID MGYG000002478_01376
CAZy Family GT83
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
574 MGYG000002478_1|CGC35 65350.45 9.3234
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002478 5444912 Isolate Finland Europe
Gene Location Start: 1831695;  End: 1833419  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002478_01376.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 4 540 1.1e-82 0.9203703703703704

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 7.65e-37 4 393 6 375
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
PRK13279 arnT 1.25e-17 1 383 2 366
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.
pfam13231 PMT_2 3.10e-08 62 220 2 160
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG0474 MgtA 4.33e-04 257 448 738 917
Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism].
COG4745 COG4745 5.96e-04 10 157 23 158
Predicted membrane-bound mannosyltransferase [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAJ74247.1 8.66e-38 14 371 10 357
ACN14933.1 1.22e-31 29 363 34 347
ADY72785.1 1.32e-28 1 384 1 355
AIF51770.1 2.56e-27 8 360 9 331
AJQ27709.1 2.78e-26 8 422 9 388

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EZM_A 3.18e-16 9 396 33 406
CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O67270 2.65e-21 10 392 5 363
Uncharacterized protein aq_1220 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1220 PE=3 SV=1
O67601 8.95e-18 5 364 2 317
Uncharacterized protein aq_1704 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1704 PE=3 SV=1
A8FRR0 1.27e-16 17 396 19 378
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Shewanella sediminis (strain HAW-EB3) OX=425104 GN=arnT PE=3 SV=1
C5BDQ8 1.29e-16 4 371 2 349
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=arnT PE=3 SV=1
A0KGY4 3.94e-16 23 382 20 362
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=arnT PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999403 0.000549 0.000053 0.000003 0.000002 0.000014

TMHMM  Annotations      download full data without filtering help

start end
7 29
64 83
90 107
161 183
204 226
258 280
311 330
335 357
364 386
418 440
447 466