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CAZyme Information: MGYG000002478_01860

You are here: Home > Sequence: MGYG000002478_01860

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola dorei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei
CAZyme ID MGYG000002478_01860
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
986 MGYG000002478_1|CGC44 112226.59 7.3203
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002478 5444912 Isolate Finland Europe
Gene Location Start: 2389804;  End: 2392764  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002478_01860.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 35 851 2.8e-133 0.949468085106383

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 9.08e-98 36 662 38 666
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 2.69e-81 36 681 49 711
beta-galactosidase.
COG3250 LacZ 6.74e-78 41 687 14 641
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 1.09e-44 33 529 6 557
beta-D-glucuronidase; Provisional
pfam02836 Glyco_hydro_2_C 2.60e-42 310 598 8 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALA73594.1 0.0 1 986 1 986
AII67837.1 0.0 1 986 1 986
QJR56807.1 0.0 1 986 1 986
QJR58397.1 0.0 1 986 1 986
QJR66886.1 0.0 1 986 1 986

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 2.53e-78 40 891 39 903
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 2.56e-78 40 891 40 904
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 4.93e-72 36 900 41 925
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
1JZ7_A 6.71e-69 32 681 42 707
E.COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_B E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_C E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_D E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],4TTG_A Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_B Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_C Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_D Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli]
3IAQ_A 9.07e-69 32 681 42 707
ChainA, Beta-galactosidase [Escherichia coli K-12],3IAQ_B Chain B, Beta-galactosidase [Escherichia coli K-12],3IAQ_C Chain C, Beta-galactosidase [Escherichia coli K-12],3IAQ_D Chain D, Beta-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 1.40e-77 40 891 40 904
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
Q6LL68 4.32e-76 41 655 48 682
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
O52847 3.36e-74 41 849 60 904
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q7MG04 2.79e-73 41 658 49 686
Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=lacZ PE=3 SV=1
Q8D4H3 9.58e-73 41 658 49 687
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.009090 0.989972 0.000301 0.000212 0.000195 0.000218

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002478_01860.