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CAZyme Information: MGYG000002478_01906
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola dorei | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei | |||||||||||
| CAZyme ID | MGYG000002478_01906 | |||||||||||
| CAZy Family | PL10 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2485197; End: 2486810 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL10 | 121 | 404 | 1.2e-137 | 0.9963636363636363 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR02474 | pec_lyase | 1.05e-23 | 121 | 382 | 1 | 263 | pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides] |
| pfam09492 | Pec_lyase | 3.27e-21 | 162 | 382 | 34 | 262 | Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AII65137.1 | 0.0 | 1 | 537 | 1 | 537 |
| QJR56764.1 | 0.0 | 1 | 537 | 1 | 537 |
| QJR58440.1 | 0.0 | 1 | 537 | 1 | 537 |
| AII67882.1 | 0.0 | 1 | 537 | 1 | 537 |
| AND19555.1 | 0.0 | 1 | 537 | 1 | 537 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1R76_A | 1.06e-14 | 105 | 317 | 78 | 304 | ChainA, pectate lyase [Niveispirillum irakense] |
| 1GXM_A | 6.72e-09 | 114 | 382 | 37 | 296 | Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus] |
| 1GXO_A | 6.66e-08 | 114 | 382 | 37 | 296 | MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001936 | 0.184798 | 0.812608 | 0.000285 | 0.000217 | 0.000151 |