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CAZyme Information: MGYG000002478_01908
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola dorei | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei | |||||||||||
| CAZyme ID | MGYG000002478_01908 | |||||||||||
| CAZy Family | CE12 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2487999; End: 2489726 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 272 | 547 | 3.8e-98 | 0.9618055555555556 |
| CE12 | 25 | 256 | 3.5e-79 | 0.9952380952380953 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd01821 | Rhamnogalacturan_acetylesterase_like | 1.46e-85 | 24 | 256 | 1 | 198 | Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria. |
| PLN02773 | PLN02773 | 1.97e-78 | 274 | 544 | 9 | 284 | pectinesterase |
| PLN02682 | PLN02682 | 2.02e-72 | 270 | 544 | 69 | 349 | pectinesterase family protein |
| pfam01095 | Pectinesterase | 2.16e-72 | 271 | 557 | 1 | 298 | Pectinesterase. |
| PLN02432 | PLN02432 | 1.26e-67 | 274 | 544 | 15 | 274 | putative pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AII67884.1 | 0.0 | 1 | 575 | 1 | 575 |
| QJR56762.1 | 0.0 | 1 | 575 | 1 | 575 |
| QJR66992.1 | 0.0 | 1 | 575 | 1 | 575 |
| QJR58442.1 | 0.0 | 1 | 575 | 1 | 575 |
| QUT87329.1 | 0.0 | 1 | 575 | 1 | 575 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1GQ8_A | 3.15e-46 | 273 | 552 | 10 | 294 | Pectinmethylesterase from Carrot [Daucus carota] |
| 1XG2_A | 1.18e-37 | 273 | 538 | 6 | 277 | ChainA, Pectinesterase 1 [Solanum lycopersicum] |
| 2NSP_A | 2.07e-37 | 270 | 563 | 4 | 340 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 1.49e-33 | 270 | 563 | 4 | 340 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 5.24e-33 | 270 | 563 | 4 | 340 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9LVQ0 | 4.98e-57 | 274 | 544 | 9 | 284 | Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1 |
| Q8VYZ3 | 1.19e-51 | 276 | 544 | 90 | 363 | Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1 |
| Q9FM79 | 4.14e-49 | 273 | 557 | 83 | 375 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
| P41510 | 8.42e-48 | 273 | 571 | 274 | 581 | Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1 |
| Q9SIJ9 | 1.08e-47 | 274 | 563 | 53 | 335 | Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.003886 | 0.990826 | 0.004359 | 0.000291 | 0.000284 | 0.000313 |
