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CAZyme Information: MGYG000002481_01221

You are here: Home > Sequence: MGYG000002481_01221

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stenotrophomonas maltophilia_F
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia_F
CAZyme ID MGYG000002481_01221
CAZy Family GH103
CAZyme Description Tn3 family transposase TnXax1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
415 MGYG000002481_51|CGC1 43981.74 8.4368
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002481 4867831 Isolate United States North America
Gene Location Start: 5166;  End: 6413  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002481_01221.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH103 31 328 1.4e-109 0.9932203389830508

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13406 SLT_2 1.03e-142 30 326 1 292
Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.
TIGR02283 MltB_2 1.17e-135 30 330 1 300
lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG2951 MltB 1.00e-111 1 336 11 343
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
TIGR02282 MltB 4.68e-53 62 328 28 290
lytic murein transglycosylase B. This family consists of lytic murein transglycosylases (murein hydrolases) in the family of MltB, which is a membrane-bound lipoprotein in Escherichia coli. The N-terminal lipoprotein modification motif is conserved in about half the members of this family. The term Slt35 describes a naturally occurring soluble fragment of MltB. Members of this family never contain the putative peptidoglycan binding domain described by pfam01471, which is associated with several classes of bacterial cell wall lytic enzymes. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
PRK10760 PRK10760 5.21e-35 2 329 8 354
murein hydrolase B; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWB80566.1 4.18e-301 1 415 1 415
QCB33632.1 1.40e-299 1 415 1 415
QGL86564.1 1.40e-299 1 415 1 415
QNG88717.1 1.40e-299 1 415 1 415
VEF36065.1 1.40e-299 1 415 1 415

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5AO8_A 1.68e-114 46 393 63 407
CrystalStructure of SltB3 from Pseudomonas aeruginosa in complex with NAG-NAM-pentapeptide [Pseudomonas aeruginosa]
5ANZ_A 6.75e-114 46 393 63 407
CrystalStructure of SltB3 from Pseudomonas aeruginosa. [Pseudomonas aeruginosa],5AO7_A Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide [Pseudomonas aeruginosa]
1LTM_A 4.69e-28 46 321 31 307
AcceleratedX-ray Structure Elucidation Of A 36 Kda Muramidase/transglycosylase Using Warp [Escherichia coli]
1D0K_A 4.87e-28 46 321 33 309
ChainA, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1D0L_A Chain A, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1D0M_A Chain A, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1QDR_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QDT_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QUS_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QUT_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli]
5O8X_A 6.86e-28 46 328 20 299
TheX-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa],5O8X_B The X-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P41052 5.16e-27 46 321 72 348
Membrane-bound lytic murein transglycosylase B OS=Escherichia coli (strain K12) OX=83333 GN=mltB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002229 0.996805 0.000229 0.000258 0.000218 0.000226

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002481_01221.