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CAZyme Information: MGYG000002482_01502

You are here: Home > Sequence: MGYG000002482_01502

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_E bromii
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Ruminococcus_E; Ruminococcus_E bromii
CAZyme ID MGYG000002482_01502
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
638 MGYG000002482_69|CGC2 74190.58 4.9835
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002482 2151595 Isolate United States North America
Gene Location Start: 119218;  End: 121134  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002482_01502.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH13 178 478 1.1e-143 0.9966777408637874
CBM48 27 111 8.3e-18 0.8947368421052632

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 15 630 108 726
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 12 625 12 619
glycogen branching enzyme; Provisional
PRK14705 PRK14705 0.0 24 620 620 1215
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 11 631 11 631
1,4-alpha-glucan branching protein GlgB.
COG0296 GlgB 0.0 15 626 14 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCT05966.1 0.0 1 631 1 632
QEY35933.1 9.45e-288 1 629 1 630
QNK41917.1 1.85e-281 6 629 8 632
QAT49197.1 2.01e-278 10 629 12 632
CAB1243441.1 5.91e-278 8 629 10 632

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQW_A 9.78e-219 14 636 136 778
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
6KLF_A 6.48e-218 14 636 112 754
ChainA, 1,4-alpha-glucan branching enzyme GlgB [Crocosphaera subtropica ATCC 51142]
5GR5_A 1.58e-217 14 636 136 778
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 2.23e-217 14 636 136 778
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 3.16e-217 14 636 136 778
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8CVY1 2.70e-229 14 626 13 626
1,4-alpha-glucan branching enzyme GlgB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=glgB PE=3 SV=1
O66936 1.34e-224 14 626 14 627
1,4-alpha-glucan branching enzyme GlgB OS=Aquifex aeolicus (strain VF5) OX=224324 GN=glgB PE=3 SV=1
Q8DLB8 6.87e-220 12 630 111 753
1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
A1U0K1 1.37e-219 12 626 11 628
1,4-alpha-glucan branching enzyme GlgB OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=glgB PE=3 SV=1
Q7UVH1 2.92e-219 24 626 127 733
1,4-alpha-glucan branching enzyme GlgB OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000027 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002482_01502.