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CAZyme Information: MGYG000002484_02296

You are here: Home > Sequence: MGYG000002484_02296

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cronobacter malonaticus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Cronobacter; Cronobacter malonaticus
CAZyme ID MGYG000002484_02296
CAZy Family GH19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
206 MGYG000002484_88|CGC1 22665.82 9.7782
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002484 4470595 Isolate Czech Republic Europe
Gene Location Start: 1416;  End: 2036  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.17

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 34 188 7.5e-35 0.5021645021645021

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3179 COG3179 1.42e-69 5 206 8 204
Predicted chitinase [General function prediction only].
cd00325 chitinase_GH19 1.77e-10 25 206 30 214
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
pfam00182 Glyco_hydro_19 1.52e-07 94 206 83 222
Chitinase class I.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QWR82089.1 7.25e-147 1 206 1 206
AHB70349.1 2.08e-146 1 206 1 206
AKE95986.1 1.54e-114 1 206 1 207
QLJ48336.1 1.54e-114 1 206 1 207
AUO58619.1 4.58e-114 1 206 1 207

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4OK7_A 1.34e-113 1 206 16 222
ChainA, Endolysin [Salmonella phage SPN1S],4OK7_B Chain B, Endolysin [Salmonella phage SPN1S],4OK7_C Chain C, Endolysin [Salmonella phage SPN1S]
3WH1_A 5.18e-08 117 188 91 167
CrystalStructure of a Family GH19 Chitinase from Bryum coronatum in complex with (GlcNAc)4 at 1.0 A resolution [Gemmabryum coronatum]
7F88_A 6.45e-08 120 188 85 158
ChainA, Chitinase A [Gemmabryum coronatum],7F88_B Chain B, Chitinase A [Gemmabryum coronatum],7F88_C Chain C, Chitinase A [Gemmabryum coronatum]
4IJ4_A 9.60e-08 117 188 90 166
CrystalStructure of a Family GH19 chitinase from Bryum coronatum in complex with (GlcNAc)4 [Gemmabryum coronatum]
4TX7_A 1.80e-07 117 206 110 228
Crystalstructure of chitinase (GH19) from Vigna unguiculata [Vigna unguiculata subsp. sesquipedalis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P44187 2.34e-27 24 201 25 193
Glycosyl hydrolase family 19 domain-containing protein HI_1415 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1415 PE=3 SV=1
O64203 6.48e-10 8 205 187 360
Endolysin A OS=Mycobacterium phage D29 OX=28369 GN=10 PE=1 SV=1
P06215 3.30e-06 117 206 181 299
Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1
P36361 3.30e-06 117 206 180 298
Endochitinase CH5B OS=Phaseolus vulgaris OX=3885 PE=3 SV=1
Q7XCK6 9.06e-06 120 168 128 177
Chitinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht8 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000066 0.000007 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002484_02296.