You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002484_02721
You are here: Home > Sequence: MGYG000002484_02721
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Cronobacter malonaticus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Cronobacter; Cronobacter malonaticus | |||||||||||
| CAZyme ID | MGYG000002484_02721 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 36174; End: 37316 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 7 | 364 | 8e-143 | 0.9943502824858758 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR00215 | lpxB | 0.0 | 2 | 378 | 4 | 385 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| COG0763 | LpxB | 0.0 | 4 | 380 | 1 | 380 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| PRK00025 | lpxB | 0.0 | 4 | 380 | 1 | 376 | lipid-A-disaccharide synthase; Reviewed |
| pfam02684 | LpxB | 0.0 | 7 | 375 | 1 | 374 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| PRK01021 | lpxB | 1.62e-47 | 9 | 326 | 231 | 551 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHB71684.1 | 6.34e-276 | 1 | 380 | 1 | 380 |
| ALX79773.1 | 6.34e-276 | 1 | 380 | 1 | 380 |
| ALB51685.1 | 1.05e-274 | 1 | 380 | 1 | 380 |
| AGE87496.1 | 1.05e-274 | 1 | 380 | 1 | 380 |
| AZP34767.1 | 1.05e-274 | 1 | 380 | 1 | 380 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 6.46e-248 | 3 | 380 | 5 | 382 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 5.30e-247 | 3 | 380 | 5 | 382 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
| 7TGH_T1 | 7.09e-07 | 6 | 363 | 17 | 448 | ChainT1, Lipid-A-disaccharide synthase [Tetrahymena thermophila] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B5F8U3 | 4.41e-257 | 3 | 380 | 5 | 382 | Lipid-A-disaccharide synthase OS=Salmonella agona (strain SL483) OX=454166 GN=lpxB PE=3 SV=1 |
| B4TYE2 | 1.79e-256 | 3 | 380 | 5 | 382 | Lipid-A-disaccharide synthase OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=lpxB PE=3 SV=1 |
| B4TK57 | 1.79e-256 | 3 | 380 | 5 | 382 | Lipid-A-disaccharide synthase OS=Salmonella heidelberg (strain SL476) OX=454169 GN=lpxB PE=3 SV=1 |
| B5RHG7 | 1.79e-256 | 3 | 380 | 5 | 382 | Lipid-A-disaccharide synthase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=lpxB PE=3 SV=1 |
| B5FJ29 | 1.79e-256 | 3 | 380 | 5 | 382 | Lipid-A-disaccharide synthase OS=Salmonella dublin (strain CT_02021853) OX=439851 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999984 | 0.000069 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |