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CAZyme Information: MGYG000002487_02633

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gordonibacter pamelaeae
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Eggerthellaceae; Gordonibacter; Gordonibacter pamelaeae
CAZyme ID MGYG000002487_02633
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
635 MGYG000002487_9|CGC1 70535.96 5.8732
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002487 3399341 Isolate United States North America
Gene Location Start: 6028;  End: 7935  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002487_02633.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 435 539 1.3e-21 0.7361111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 5.72e-29 407 618 11 223
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16889 Hepar_II_III_N 1.65e-10 100 289 59 262
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCA89073.1 5.01e-112 72 617 35 574
QNU66795.1 2.29e-64 62 614 89 640
QIY72678.1 4.24e-63 67 614 83 626
QUW80363.1 4.24e-63 67 614 83 626
ASC04272.1 2.98e-56 66 619 43 596

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

1.000039 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002487_02633.