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CAZyme Information: MGYG000002490_03440

You are here: Home > Sequence: MGYG000002490_03440

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_B thiaminolyticus
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_B; Paenibacillus_B thiaminolyticus
CAZyme ID MGYG000002490_03440
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
510 MGYG000002490_30|CGC4 57417.77 5.0886
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002490 6537383 Isolate Japan Asia
Gene Location Start: 230232;  End: 231764  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002490_03440.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 23 218 2.1e-47 0.5773809523809523
GH5 167 378 9.2e-17 0.4965034965034965

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG2730 BglC 8.30e-12 21 212 37 207
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].
pfam18564 Glyco_hydro_5_C 1.18e-06 416 467 1 53
Glycoside hydrolase family 5 C-terminal domain. This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.
pfam00150 Cellulase 1.78e-06 23 404 2 271
Cellulase (glycosyl hydrolase family 5).
pfam02449 Glyco_hydro_42 1.90e-04 51 105 13 65
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
pfam01301 Glyco_hydro_35 0.003 49 154 26 125
Glycosyl hydrolases family 35.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDM45840.1 0.0 1 510 1 510
QJD87094.1 5.92e-176 14 503 4 496
QTH41332.1 1.19e-175 14 503 4 496
QNK55040.1 7.02e-172 18 503 8 495
QOT09561.1 6.75e-132 16 506 6 493

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OSW_A 5.85e-34 10 457 26 437
Endo-glycoceramidaseII from Rhodococcus sp. [Rhodococcus sp.],2OSW_B Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OYK_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYK_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYL_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYL_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYM_A Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.],2OYM_B Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.]
2OSX_A 2.78e-33 10 457 26 437
ChainA, Endoglycoceramidase II [Rhodococcus sp.]
2OSY_A 3.79e-33 10 457 26 437
ChainA, Endoglycoceramidase II [Rhodococcus sp.],2OSY_B Chain B, Endoglycoceramidase II [Rhodococcus sp.]
5CCU_A 7.34e-24 14 201 44 227
ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5CCU_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
5J14_A 7.34e-24 14 201 44 227
ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J14_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_A Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A3S5YBC7 3.81e-23 14 201 36 219
Endoglycoceramidase I OS=Rhodococcus hoagii (strain 103S) OX=685727 GN=REQ_38260 PE=1 SV=1
Q6L6S1 3.46e-22 22 201 33 235
Endoglycoceramidase OS=Hydra vulgaris OX=6087 PE=1 SV=1
H1AE13 2.68e-21 12 197 4 248
Glucosylceramidase OS=Neosartorya fumigata OX=746128 GN=egc1 PE=1 SV=1
Q9GV16 8.14e-20 20 200 40 243
Endoglycoceramidase OS=Cyanea nozakii OX=135523 PE=1 SV=1
I1BTD7 6.55e-16 18 200 19 258
Glucosylceramidase OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=ERC1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000026 0.000009 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002490_03440.