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CAZyme Information: MGYG000002490_04047

You are here: Home > Sequence: MGYG000002490_04047

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_B thiaminolyticus
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_B; Paenibacillus_B thiaminolyticus
CAZyme ID MGYG000002490_04047
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
600 68464.79 7.6122
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002490 6537383 Isolate Japan Asia
Gene Location Start: 417828;  End: 419630  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002490_04047.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5555 COG5555 4.31e-08 157 427 43 282
Cytolysin, a secreted calcineurin-like phosphatase [Intracellular trafficking, secretion, and vesicular transport].
cd00839 MPP_PAPs 1.13e-07 202 390 29 203
purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
pfam14200 RicinB_lectin_2 1.17e-06 492 577 2 86
Ricin-type beta-trefoil lectin domain-like.
cd07396 MPP_Nbla03831 1.08e-05 160 401 5 212
Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
cd07395 MPP_CSTP1 6.50e-05 159 394 8 221
Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDM42212.1 0.0 1 600 1 600
AQT83473.1 1.57e-208 4 598 1 594
ARF70105.1 8.65e-208 4 598 1 593
QDX94829.1 1.31e-144 157 597 9 469
AUM94646.1 4.48e-135 157 580 17 451

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1QXM_A 1.34e-12 445 591 13 152
Crystalstructure of a hemagglutinin component (HA1) from type C Clostridium botulinum [Clostridium botulinum D phage],1QXM_B Crystal structure of a hemagglutinin component (HA1) from type C Clostridium botulinum [Clostridium botulinum D phage]
4OUJ_A 2.60e-12 453 591 10 142
Crystalstructure of HA33B-Lac [Clostridium botulinum B1 str. Okra],4OUJ_B Crystal structure of HA33B-Lac [Clostridium botulinum B1 str. Okra]
3WIN_A 2.84e-12 453 591 31 163
Clostridiumbotulinum Hemagglutinin [Clostridium botulinum B],3WIN_B Clostridium botulinum Hemagglutinin [Clostridium botulinum B]
5B2H_A 3.62e-12 451 591 3 136
Crystalstructure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum],5B2H_B Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum]
3AJ5_A 3.75e-12 451 591 5 138
HA1(HA33) subcomponent of botulinum type C progenitor toxin complexed with N-acetylgalactosamine, bound at site II [Clostridium botulinum],3AJ5_B HA1 (HA33) subcomponent of botulinum type C progenitor toxin complexed with N-acetylgalactosamine, bound at site II [Clostridium botulinum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0DPR0 2.05e-11 451 591 5 138
Main hemagglutinin component type C OS=Clostridium botulinum C phage OX=12336 GN=HA-33 PE=1 SV=1
P0DPR1 2.05e-11 451 591 5 138
Main hemagglutinin component type D OS=Clostridium botulinum D phage OX=29342 GN=ha-33 PE=1 SV=1
Q9GV36 1.89e-08 472 574 584 688
Pierisin OS=Pieris brassicae OX=7116 PE=1 SV=1
Q9U8Q4 2.25e-07 472 574 584 688
Pierisin OS=Pieris rapae OX=64459 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000091 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002490_04047.