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CAZyme Information: MGYG000002494_00784

You are here: Home > Sequence: MGYG000002494_00784

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter_B koseri
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_B; Citrobacter_B koseri
CAZyme ID MGYG000002494_00784
CAZy Family CE8
CAZyme Description Putative acyl-CoA thioester hydrolase YbhC
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
427 MGYG000002494_50|CGC10 45941.24 6.1343
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002494 4844850 Isolate China Asia
Gene Location Start: 582704;  End: 583987  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002494_00784.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 92 420 4.3e-55 0.875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 0.0 1 421 1 405
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PRK10531 PRK10531 0.0 1 420 1 422
putative acyl-CoA thioester hydrolase.
pfam01095 Pectinesterase 6.24e-12 81 344 1 210
Pectinesterase.
PLN02708 PLN02708 6.72e-12 69 306 216 413
Probable pectinesterase/pectinesterase inhibitor
PLN02488 PLN02488 1.04e-10 61 427 169 482
probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCL47755.1 8.34e-314 1 427 1 427
AVE60316.1 8.34e-314 1 427 1 427
QJI78533.1 1.38e-312 1 427 1 427
AVE67970.1 1.38e-312 1 427 1 427
QCQ72158.1 1.38e-312 1 427 1 427

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GRH_A 1.17e-249 29 427 24 422
Crystalstructure of escherichia coli ybhc [Escherichia coli K-12]
4PMH_A 1.03e-64 33 419 1 366
Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P46130 2.12e-269 1 427 1 427
Putative acyl-CoA thioester hydrolase YbhC OS=Escherichia coli (strain K12) OX=83333 GN=ybhC PE=1 SV=2
Q47474 1.01e-116 1 417 1 430
Pectinesterase B OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemB PE=1 SV=2
P55743 8.62e-110 35 414 5 396
Pectinesterase B OS=Pectobacterium parmentieri OX=1905730 GN=pemB PE=3 SV=2
E7CIP7 8.71e-64 33 419 17 382
Pectinesterase OS=Sitophilus oryzae OX=7048 GN=CE8-1 PE=1 SV=1
P58601 5.48e-31 39 419 30 394
Pectinesterase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pme PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000058 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002494_00784.