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CAZyme Information: MGYG000002494_03499

You are here: Home > Sequence: MGYG000002494_03499

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter_B koseri
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_B; Citrobacter_B koseri
CAZyme ID MGYG000002494_03499
CAZy Family GT41
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1119 125698.06 5.8489
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002494 4844850 Isolate China Asia
Gene Location Start: 3438752;  End: 3442111  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002494_03499.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT41 528 1107 1.2e-124 0.6709219858156028

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3914 Spy 4.96e-86 619 1104 90 618
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].
pfam13844 Glyco_transf_41 6.66e-29 736 1072 65 521
Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1.
pfam10119 MethyTransf_Reg 1.39e-18 203 288 1 84
Predicted methyltransferase regulatory domain. Members of this family of domains are found in various prokaryotic methyltransferases, where they regulate the activity of the methyltransferase domain.
sd00006 TPR 9.78e-09 630 704 1 75
Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.
TIGR02917 PEP_TPR_lipo 2.03e-08 538 704 612 810
putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCL48839.1 0.0 1 1119 1 1119
CDZ82997.1 0.0 1 1119 1 1119
QVV63185.1 0.0 1 1119 1 1119
QJI77510.1 0.0 1 1119 1 1119
AYY75066.1 0.0 1 1119 1 1119

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5DJS_A 9.54e-82 622 1106 35 521
Thermobaculumterrenum O-GlcNAc transferase mutant - K341M [Thermobaculum terrenum],5DJS_B Thermobaculum terrenum O-GlcNAc transferase mutant - K341M [Thermobaculum terrenum],5DJS_C Thermobaculum terrenum O-GlcNAc transferase mutant - K341M [Thermobaculum terrenum],5DJS_D Thermobaculum terrenum O-GlcNAc transferase mutant - K341M [Thermobaculum terrenum]
2VSN_A 1.61e-46 623 1071 50 529
Structureand topological arrangement of an O-GlcNAc transferase homolog: insight into molecular control of intracellular glycosylation [Xanthomonas campestris pv. campestris str. 8004],2VSN_B Structure and topological arrangement of an O-GlcNAc transferase homolog: insight into molecular control of intracellular glycosylation [Xanthomonas campestris pv. campestris str. 8004]
2JLB_A 2.92e-46 623 1071 50 529
Xanthomonascampestris putative OGT (XCC0866), complex with UDP- GlcNAc phosphonate analogue [Xanthomonas campestris pv. campestris],2JLB_B Xanthomonas campestris putative OGT (XCC0866), complex with UDP- GlcNAc phosphonate analogue [Xanthomonas campestris pv. campestris],2VSY_A Xanthomonas campestris putative OGT (XCC0866), apostructure [Xanthomonas campestris pv. campestris str. ATCC 33913],2VSY_B Xanthomonas campestris putative OGT (XCC0866), apostructure [Xanthomonas campestris pv. campestris str. ATCC 33913],2XGM_A Substrate and product analogues as human O-GlcNAc transferase inhibitors. [Xanthomonas campestris],2XGM_B Substrate and product analogues as human O-GlcNAc transferase inhibitors. [Xanthomonas campestris],2XGO_A XcOGT in complex with UDP-S-GlcNAc [Xanthomonas campestris],2XGO_B XcOGT in complex with UDP-S-GlcNAc [Xanthomonas campestris],2XGS_A XcOGT in complex with C-UDP [Xanthomonas campestris],2XGS_B XcOGT in complex with C-UDP [Xanthomonas campestris]
5DNK_A 8.19e-34 9 290 45 329
Thestructure of PKMT1 from Rickettsia prowazekii in complex with AdoHcy [Rickettsia prowazekii str. Madrid E],5DNK_B The structure of PKMT1 from Rickettsia prowazekii in complex with AdoHcy [Rickettsia prowazekii str. Madrid E],5DO0_A The structure of PKMT1 from Rickettsia prowazekii [Rickettsia prowazekii str. Madrid E],5DO0_B The structure of PKMT1 from Rickettsia prowazekii [Rickettsia prowazekii str. Madrid E],5DPD_A The structure of PKMT1 from Rickettsia prowazekii in complex with AdoMet [Rickettsia prowazekii str. Madrid E],5DPD_B The structure of PKMT1 from Rickettsia prowazekii in complex with AdoMet [Rickettsia prowazekii str. Madrid E]
5DOO_A 8.73e-34 11 290 19 301
Thestructure of PKMT2 from Rickettsia typhi [Rickettsia typhi str. Wilmington],5DOO_B The structure of PKMT2 from Rickettsia typhi [Rickettsia typhi str. Wilmington],5DPL_A The structure of PKMT2 from Rickettsia typhi in complex with AdoHcy [Rickettsia typhi str. Wilmington],5DPL_B The structure of PKMT2 from Rickettsia typhi in complex with AdoHcy [Rickettsia typhi str. Wilmington]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RVB2 5.67e-62 691 1111 429 856
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum OX=4081 GN=SPY PE=2 SV=1
Q96301 6.42e-62 692 1111 425 851
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana OX=3702 GN=SPY PE=1 SV=1
O82039 8.08e-61 691 1111 429 856
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Petunia hybrida OX=4102 GN=SPY PE=2 SV=1
Q6YZI0 3.35e-60 689 1111 413 842
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa subsp. japonica OX=39947 GN=SPY PE=2 SV=1
O82422 9.68e-59 692 1111 416 842
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Hordeum vulgare OX=4513 GN=SPY PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002494_03499.