CAZyme Information: MGYG000002497_00359

Basic Information

• Species: Klebsiella aerogenes
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella aerogenes
• CAZyme ID: MGYG000002497_00359
• CAZy Family: GH0
• CAZyme Description: HTH-type transcriptional activator RhaS

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
765	MGYG000002497_2|CGC8	88519.58	7.9785

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002497	5138968	Isolate	United States	North America

• Gene Location: Start: 363951; End: 366248 Strand: -

Full Sequence      

MEHHLGDFSLTVRDIRHFSPPESDGLTLLWLLEGSARLQLGEAPQQMRVDGLAIVNRRQR
WQITGEEANAVMILNLAAGWLTRLDSDFFACDYRVNGENMDAADNLRQLMRQLLVAGLVN
HQSRYRLEANRWLSEIALLLATRFTQPIVPSLRRGAENWSRRIINVVARIEANYQRRISL
QEVAAAEFVSEAWLSRLFHKEVGVSFVQYITALRLGKAAEQLLATRRSVQQVAQDNGFAS
ARIMSDLFKRQHGVTPRQFRQQQPQPAARPRVNASEIWYPVAVERLYARLNEAEKNSDNT
PPLLLNPRQTRLVDIRQLPARAPVLRHTRTIVTVRELDDLLREDVRRELEQLQQTLPVYG
IDIHDPFLSSRLFGEGWDDPTLAGYACWYNLQQLFSWLAQKGWTVLLHTGLTTRCDLLQR
FLQLAANHFPPTTLASWRFVWHWSPQASEAARQQAWRQQREVLASTLQQPQMGIWHRFPQ
SDIADDPLLHSPLLSEADFLACQADANELLDLAQADSSKLAASESYPRQKLRQIHNALRQ
RQLSLPLWLLSWNTLTGDTRDTNGRFFRGALLMDNLLGVAEQVWLAGFWLNSGLQGEARD
NGKLDTSSLALHYLHGLPRPVYWVLWLWRRLRGEVLINDKNLLLLRHNGHYQLLLRNTVI
FNPWLSSEEAFTQRFRQPYTLRLEGLEGHWRIKQHLFDQHHGALFPLFEAFRSRSGPDEE
DYRWLQHHARPALSVHEEQMDDGWLRVDSLQSNALALYEFTPLND

Enzyme Prediction     

No EC number prediction in MGYG000002497_00359.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3664	XynB	3.29e-21	416	763	85	427	Beta-xylosidase [Carbohydrate transport and metabolism].
COG2207	AraC	1.98e-20	160	255	19	114	AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
smart00342	HTH_ARAC	2.42e-19	177	255	1	79	helix_turn_helix, arabinose operon control protein.
COG4977	GlxA	4.37e-16	146	255	207	314	Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].
pfam12833	HTH_18	2.65e-15	183	255	1	74	Helix-turn-helix domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBS11906.1	0.0	1	765	1	765
QGT30842.1	0.0	1	765	1	765
QGT21157.1	0.0	1	765	1	765
QRZ88614.1	0.0	1	765	1	765
QSB59431.1	0.0	1	765	1	765

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6SWI_A	7.00e-12	175	260	20	105	TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]
3OIO_A	9.90e-09	162	266	8	112	Crystalstructure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum [Chromobacterium violaceum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q6GD21	2.49e-37	24	759	21	738	Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q8NYT6	2.49e-37	24	759	21	738	Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q6GKK1	4.45e-37	24	759	21	738	Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q936F1	1.06e-36	24	759	21	738	Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2
Q99XB1	1.41e-36	24	759	21	738	Uncharacterized HTH-type transcriptional regulator SAV0101 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0101 PE=4 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000080	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002497_00359.