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CAZyme Information: MGYG000002498_00938

You are here: Home > Sequence: MGYG000002498_00938

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterobacter sichuanensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter sichuanensis
CAZyme ID MGYG000002498_00938
CAZy Family GH19
CAZyme Description GlcNAc-binding protein A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
611 MGYG000002498_2|CGC2 66610.99 4.5261
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002498 4685711 Isolate Singapore Asia
Gene Location Start: 121696;  End: 123531  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002498_00938.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 82 339 1.1e-76 0.9956709956709957
CBM73 559 609 9.3e-24 0.9444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00325 chitinase_GH19 1.89e-73 90 339 1 224
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
pfam00182 Glyco_hydro_19 4.08e-40 106 330 25 225
Chitinase class I.
COG3979 COG3979 5.44e-32 69 224 40 181
Chitodextrinase [Carbohydrate transport and metabolism].
PRK13211 PRK13211 6.25e-13 447 611 305 477
N-acetylglucosamine-binding protein GbpA.
pfam18911 PKD_4 9.59e-10 452 530 8 80
PKD domain. This entry is composed of PKD domains found in bacterial surface proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QFQ08506.1 0.0 1 611 1 606
QCC92986.1 0.0 1 611 1 613
QCD10084.1 0.0 1 611 1 613
QCC97987.1 0.0 1 611 1 613
AIV29075.1 0.0 1 611 1 613

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V92_A 1.13e-34 106 348 29 245
ChainA, GH19 Chitinase [Ficus microcarpa],7V92_B Chain B, GH19 Chitinase [Ficus microcarpa],7V92_C Chain C, GH19 Chitinase [Ficus microcarpa],7V92_D Chain D, GH19 Chitinase [Ficus microcarpa]
7V91_A 1.96e-33 106 348 29 245
ChainA, GH19 Chitinase [Ficus microcarpa],7V91_B Chain B, GH19 Chitinase [Ficus microcarpa],7V91_C Chain C, GH19 Chitinase [Ficus microcarpa],7V91_D Chain D, GH19 Chitinase [Ficus microcarpa]
2BAA_A 1.24e-32 106 329 29 228
TheRefined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution [Hordeum vulgare]
4MST_A 2.26e-32 106 348 26 242
CrystalStructure of a putative catalytic domain of a chitinase-like protein (HbCLP1) from Hevea brasiliensis [Hevea brasiliensis],4MST_B Crystal Structure of a putative catalytic domain of a chitinase-like protein (HbCLP1) from Hevea brasiliensis [Hevea brasiliensis]
1CNS_A 1.12e-31 106 329 29 228
CrystalStructure Of Chitinase At 1.91a Resolution [Hordeum vulgare],1CNS_B Crystal Structure Of Chitinase At 1.91a Resolution [Hordeum vulgare]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P52404 1.11e-39 106 348 94 310
Endochitinase 2 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB2 PE=2 SV=1
P52403 2.21e-39 106 348 96 312
Endochitinase 1 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB1 PE=2 SV=1
P52405 1.51e-38 106 348 96 312
Endochitinase 3 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB3 PE=2 SV=1
P24091 1.74e-38 106 348 102 318
Endochitinase B OS=Nicotiana tabacum OX=4097 GN=CHN50 PE=1 SV=1
P08252 3.71e-38 106 348 107 323
Endochitinase A OS=Nicotiana tabacum OX=4097 GN=CHN48 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000968 0.925303 0.072725 0.000432 0.000301 0.000239

TMHMM  Annotations      download full data without filtering help

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