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CAZyme Information: MGYG000002506_02587
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Escherichia coli_D | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli_D | |||||||||||
| CAZyme ID | MGYG000002506_02587 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2626036; End: 2628798 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam13524 | Glyco_trans_1_2 | 2.47e-20 | 589 | 681 | 1 | 92 | Glycosyl transferases group 1. |
| COG4641 | COG4641 | 1.85e-16 | 433 | 684 | 98 | 359 | Spore maturation protein CgeB [Cell cycle control, cell division, chromosome partitioning]. |
| cd02525 | Succinoglycan_BP_ExoA | 4.25e-13 | 695 | 879 | 1 | 202 | ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. |
| pfam12996 | DUF3880 | 1.02e-12 | 447 | 523 | 1 | 78 | DUF based on E. rectale Gene description (DUF3880). Based on Eubacterium rectale gene EUBREC_3218. As seen in gene expression experiments (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE14737), It appears to be upregulated in the presence of Bacteroides thetaiotaomicron vs when isolated in culture. |
| pfam00535 | Glycos_transf_2 | 9.44e-12 | 697 | 847 | 1 | 164 | Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOG54630.1 | 1.36e-188 | 131 | 906 | 81 | 823 |
| QZY57026.1 | 2.25e-152 | 362 | 909 | 5 | 549 |
| BAL01124.1 | 7.89e-149 | 362 | 909 | 5 | 547 |
| QZY57027.1 | 6.25e-145 | 357 | 909 | 12 | 560 |
| AHF08475.1 | 2.37e-144 | 362 | 909 | 167 | 704 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000108 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |