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CAZyme Information: MGYG000002506_04233

You are here: Home > Sequence: MGYG000002506_04233

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Escherichia coli_D
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli_D
CAZyme ID MGYG000002506_04233
CAZy Family CE11
CAZyme Description UDP-3-O-acyl-N-acetylglucosamine deacetylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
305 MGYG000002506_1|CGC51 33955.92 5.6413
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002506 5339468 Isolate not provided not provided
Gene Location Start: 4414133;  End: 4415050  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.5.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE11 4 276 1e-121 0.992619926199262

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0774 LpxC 0.0 1 302 1 300
UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis].
PRK13186 lpxC 0.0 1 299 1 295
UDP-3-O-acyl-N-acetylglucosamine deacetylase.
TIGR00325 lpxC 0.0 2 301 1 297
UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
pfam03331 LpxC 7.84e-178 4 277 1 271
UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A.
PRK13188 PRK13188 4.82e-89 1 275 2 298
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QFX37759.1 1.68e-224 1 305 1 305
QHF69794.1 1.68e-224 1 305 1 305
AUZ13911.1 1.68e-224 1 305 1 305
QFH05796.1 1.68e-224 1 305 1 305
AML08323.1 1.68e-224 1 305 1 305

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MQY_A 6.13e-226 1 305 1 305
CrystalStructure of the Escherichia coli LpxC/LPC-138 complex [Escherichia coli]
4MDT_A 2.05e-224 1 305 1 305
Structureof LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_B Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_C Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_D Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli]
3P3G_A 5.70e-223 1 300 1 300
CrystalStructure of the Escherichia coli LpxC/LPC-009 complex [Escherichia coli IHE3034],3PS1_A Crystal structure of the Escherichia Coli LPXC/LPC-011 complex [Escherichia coli IHE3034],3PS2_A Crystal structure of the Escherichia Coli LPXC/LPC-012 complex [Escherichia coli IHE3034],3PS3_A Crystal structure of the Escherichia Coli LPXC/LPC-053 complex [Escherichia coli IHE3034],4IS9_A Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4IS9_B Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4ISA_A Crystal Structure of the Escherichia coli LpxC/BB-78485 complex [Escherichia coli IHE3034]
3NZK_A 9.88e-213 1 305 6 310
Structureof LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica],3NZK_B Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica]
5N8C_A 1.17e-128 1 304 2 304
Crystalstructure of Pseudomonas aeruginosa LpxC complexed with inhibitor [Pseudomonas aeruginosa],5N8C_B Crystal structure of Pseudomonas aeruginosa LpxC complexed with inhibitor [Pseudomonas aeruginosa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C4ZRJ1 3.36e-225 1 305 1 305
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=lpxC PE=3 SV=1
P0A727 3.36e-225 1 305 1 305
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Escherichia coli O157:H7 OX=83334 GN=lpxC PE=3 SV=1
P0A726 3.36e-225 1 305 1 305
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=lpxC PE=3 SV=1
P0A725 3.36e-225 1 305 1 305
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Escherichia coli (strain K12) OX=83333 GN=lpxC PE=1 SV=1
P0A728 3.36e-225 1 305 1 305
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Shigella flexneri OX=623 GN=lpxC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000028 0.000007 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002506_04233.