CAZyme Information: MGYG000002510_02593

Basic Information

• Species: Klebsiella quasipneumoniae
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella quasipneumoniae
• CAZyme ID: MGYG000002510_02593
• CAZy Family: GH0
• CAZyme Description: HTH-type transcriptional activator RhaR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
773	MGYG000002510_6|CGC3	89089.14	9.623

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002510	5247162	Isolate	Australia	Oceania

• Gene Location: Start: 179040; End: 181361 Strand: -

Full Sequence      

MEQHSGDFSVTVRDVRQLSQPESDLLTLLWVLEGSVNLAEAEGAPQQLAVDALAIVNRNR
RWSLRSAGGNAVMILTLSASWLARLDNAFFAVDYQISPRTRDADDGLRRLMRQLLVSGLV
NHPGHYRLEANRWLSEIALLLATRFSQPIAFTPRRDAEKWSRRIASVVARIDANYQRRLS
LQEVAAAEFVSEAWLSRLFHKEVGVSFVQYLTALRLRHAADQLLTTRKPVQQIAREQGFA
STRMMSDLFKRHHGVTPRQYRERSPREPGRPRPPQGDRWQPVAVDRLYARLNEPEQRDRE
SQPLLINPPQTREINLHQRPARAAMLRHTRMVVTVRELDDLLREDVRRELEQLHRALPVY
AIDINDAFLSSRLFGTGWDDPQMAGYACWYNLQQIFSWLAAMGWQVILHTGVTTRSDLLQ
RFLQLAANHFPPTTLSSWRFVWHWSPQASEAARQAAWRQQREVLHRLLPQPQLGIWHRFA
ASAPGDDPLFHSPLLAEADFLACQADANERLDLAQADSSSLASSEHYPAHKLRQIHSALR
QRQLNLPLWLLSWNTLTGDTRDTNGRFFRGALLMDNLLGVADQVWLAGFWLNSGLQGEAR
ANGKLDTSSLALHYLHGLPRPVYWVLWLWRRLRGEILFHDKNLLLLHHQGHYQLLLRNTV
VYNPWLSSEAAFIQRFSQPYNVRLQGLKGRWRIKQHLFDQHHGALFPLVDAFRSRSGPDA
EDYQWLMHQARPALSVEEARLDGHWLRVDSLESNALALYEFTPQYSPDEDPDA

Enzyme Prediction     

No EC number prediction in MGYG000002510_02593.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3664	XynB	1.65e-25	415	763	83	426	Beta-xylosidase [Carbohydrate transport and metabolism].
smart00342	HTH_ARAC	4.66e-24	178	261	1	84	helix_turn_helix, arabinose operon control protein.
COG2207	AraC	2.69e-23	161	262	19	120	AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
COG4977	GlxA	4.05e-21	146	261	206	319	Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].
pfam12833	HTH_18	3.66e-20	184	262	1	80	Helix-turn-helix domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBR83816.1	0.0	1	773	1	773
QWA95185.1	0.0	1	773	1	773
QSA36653.1	0.0	1	773	1	773
QOF50630.1	0.0	1	773	1	773
QTL42111.1	0.0	1	773	1	773

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6SWI_A	1.25e-13	176	261	20	105	TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]
3OIO_A	6.46e-08	163	261	8	106	Crystalstructure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum [Chromobacterium violaceum]
3LSG_A	4.48e-07	190	262	31	103	Thecrystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_B The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_C The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_D The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_E The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q6GKK1	5.97e-33	7	736	4	714	Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q6GD21	5.97e-33	26	736	23	714	Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q8NYT6	5.97e-33	26	736	23	714	Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q936F1	1.86e-32	26	736	23	714	Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2
Q5HJR8	1.86e-32	26	736	23	714	Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000046	0.000002	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002510_02593.