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CAZyme Information: MGYG000002511_05019

You are here: Home > Sequence: MGYG000002511_05019

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Klebsiella variicola
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella variicola
CAZyme ID MGYG000002511_05019
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
159 17801.52 10.1362
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002511 5624300 Isolate Australia Oceania
Gene Location Start: 5855;  End: 6334  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002511_05019.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 33 149 1.5e-17 0.837037037037037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK13722 PRK13722 4.46e-72 1 149 1 149
lytic transglycosylase; Provisional
cd13400 LT_IagB-like 3.66e-42 30 142 1 107
Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
PRK15328 PRK15328 7.37e-34 1 146 1 143
type III secretion system invasion protein IagB.
pfam01464 SLT 1.37e-20 23 141 1 114
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
COG0741 MltE 3.43e-13 26 120 146 240
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIE03880.1 5.87e-114 1 159 1 159
AUV56099.1 1.68e-113 1 159 1 159
CDR98268.1 2.39e-113 1 158 1 158
QLT91630.1 9.75e-113 1 158 1 158
AQL24043.1 1.97e-112 1 158 1 158

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4XP8_A 2.08e-17 21 105 2 87
Structureof EtgA D60N mutant [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P14499 3.14e-71 1 149 1 149
X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
P47737 4.46e-71 1 149 1 149
X polypeptide OS=Escherichia coli (strain K12) OX=83333 GN=yubQ PE=3 SV=1
P17738 2.57e-70 1 149 1 149
X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
Q00739 1.04e-69 1 149 1 149
X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
E1WAC2 6.06e-24 5 146 6 143
Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000758 0.997697 0.000762 0.000287 0.000247 0.000239

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002511_05019.