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CAZyme Information: MGYG000002517_03016
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Roseburia hominis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia hominis | |||||||||||
| CAZyme ID | MGYG000002517_03016 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3285005; End: 3292690 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 4.40e-74 | 1544 | 2065 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam12960 | DUF3849 | 2.17e-35 | 943 | 1062 | 3 | 124 | Protein of unknown function (DUF3849). A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This domain frequently seen with DUF3848. |
| COG4646 | COG4646 | 1.08e-25 | 2164 | 2395 | 401 | 635 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG0827 | YtxK | 5.83e-10 | 1393 | 1521 | 219 | 341 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 5.00e-09 | 2011 | 2070 | 1 | 62 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 1.12e-297 | 1248 | 2555 | 1548 | 2948 |
| QIW86704.1 | 1.13e-297 | 1248 | 2555 | 1616 | 3016 |
| QIW86628.1 | 1.13e-297 | 1248 | 2555 | 1616 | 3016 |
| AEY69616.1 | 9.27e-288 | 1248 | 2555 | 1689 | 3092 |
| AXF51455.1 | 1.21e-285 | 1248 | 2555 | 1782 | 3185 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 2.38e-33 | 1258 | 2365 | 40 | 1225 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000070 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |