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CAZyme Information: MGYG000002517_03112

You are here: Home > Sequence: MGYG000002517_03112

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Roseburia hominis
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia hominis
CAZyme ID MGYG000002517_03112
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
589 MGYG000002517_1|CGC48 65327.01 4.2327
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002517 3592125 Isolate United Kingdom Europe
Gene Location Start: 3371226;  End: 3372995  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002517_03112.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 220 574 9.6e-37 0.9222972972972973

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 2.35e-61 255 584 8 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 1.92e-38 274 584 120 418
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 1.09e-26 281 581 24 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
smart00636 Glyco_18 4.52e-21 332 575 78 333
Glyco_18 domain.
pfam00704 Glyco_hydro_18 2.96e-20 339 574 82 305
Glycosyl hydrolases family 18.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEN98276.1 0.0 1 589 1 589
CBL13521.1 6.40e-299 5 589 2 610
CBL10290.1 6.40e-299 5 589 2 610
VCV23980.1 3.68e-298 5 589 2 610
CBK92324.1 5.07e-205 5 589 2 577

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 1.08e-14 330 577 80 312
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4S3K_A 6.08e-14 339 581 190 420
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
5JH8_A 3.58e-13 297 586 43 312
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
5XWQ_A 1.69e-08 337 577 74 356
Crystalstructure of chitinase (RmChi1) from Rhizomucor miehei (sp p32 2 1, MR) [Rhizomucor miehei],5YUQ_A Chain A, Chintase [Rhizomucor miehei],5YUQ_B Chain B, Chintase [Rhizomucor miehei],7FBT_A Chain A, Chitinase [Rhizomucor miehei]
1ITX_A 2.55e-08 337 573 139 403
ChainA, Glycosyl Hydrolase [Niallia circulans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32258 1.31e-19 293 586 63 341
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
O31682 1.79e-16 281 477 26 214
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1
O05495 1.32e-14 330 581 172 409
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P20533 2.02e-07 337 573 171 435
Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1
C0H404 2.08e-06 542 588 37 83
Probably inactive glycosylase YkzR OS=Bacillus subtilis (strain 168) OX=224308 GN=ykzR PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.789216 0.189924 0.002423 0.001256 0.000730 0.016461

TMHMM  Annotations      download full data without filtering help

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