You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002517_03227
You are here: Home > Sequence: MGYG000002517_03227
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Roseburia hominis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia hominis | |||||||||||
| CAZyme ID | MGYG000002517_03227 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 3490227; End: 3497672 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 4.43e-63 | 1153 | 1694 | 1 | 538 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 5.56e-25 | 1795 | 2030 | 401 | 636 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00487 | DEXDc | 1.12e-10 | 1640 | 1745 | 7 | 112 | DEAD-like helicases superfamily. |
| smart00490 | HELICc | 2.12e-10 | 2083 | 2169 | 1 | 82 | helicase superfamily c-terminal domain. |
| cd18793 | SF2_C_SNF | 5.67e-09 | 2083 | 2181 | 41 | 135 | C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXF51455.1 | 1.15e-293 | 866 | 2436 | 1791 | 3427 |
| AEY69616.1 | 1.88e-293 | 866 | 2436 | 1698 | 3334 |
| QIW86704.1 | 1.43e-290 | 839 | 2396 | 1596 | 3219 |
| QIW86628.1 | 1.43e-290 | 839 | 2396 | 1596 | 3219 |
| ASV45029.1 | 2.01e-290 | 850 | 2396 | 1541 | 3151 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 2.15e-29 | 948 | 2261 | 91 | 1594 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000063 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |