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CAZyme Information: MGYG000002518_00497
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Serratia surfactantfaciens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Serratia; Serratia surfactantfaciens | |||||||||||
| CAZyme ID | MGYG000002518_00497 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | D-alanine--poly(phosphoribitol) ligase subunit 1 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 262042; End: 278091 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd05930 | A_NRPS | 0.0 | 534 | 1024 | 1 | 444 | The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. |
| PRK12316 | PRK12316 | 0.0 | 1607 | 4086 | 2636 | 5133 | peptide synthase; Provisional |
| PRK12467 | PRK12467 | 0.0 | 59 | 2609 | 1097 | 3668 | peptide synthase; Provisional |
| PRK12316 | PRK12316 | 0.0 | 50 | 2938 | 24 | 2911 | peptide synthase; Provisional |
| cd00833 | PKS | 0.0 | 4112 | 4534 | 1 | 421 | polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BAY90071.1 | 6.87e-285 | 3318 | 5078 | 365 | 2217 |
| BAZ00088.1 | 3.36e-283 | 3539 | 5047 | 594 | 2188 |
| BAZ75991.1 | 3.36e-283 | 3539 | 5047 | 594 | 2188 |
| BAY30132.1 | 2.56e-281 | 3318 | 5047 | 366 | 2190 |
| AFY93865.1 | 2.19e-272 | 3547 | 5047 | 362 | 1952 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7LY7_A | 2.04e-180 | 1567 | 2587 | 5 | 991 | ChainA, BmdB, Bacillamide NRPS [Thermoactinomyces vulgaris] |
| 7LY4_E | 2.10e-180 | 1567 | 2587 | 5 | 991 | ChainE, BmdB, bacillamide NRPS [Thermoactinomyces vulgaris] |
| 4MZ0_A | 9.42e-157 | 4111 | 4979 | 38 | 935 | ChainA, CurL [Moorena producens 3L],4MZ0_B Chain B, CurL [Moorena producens 3L] |
| 6P1J_A | 6.85e-151 | 113 | 1024 | 41 | 964 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae] |
| 4WKY_A | 3.29e-142 | 4112 | 4619 | 7 | 515 | Streptomcyesalbus JA3453 oxazolomycin ketosynthase domain OzmN KS2 [Streptomyces albus],4WKY_B Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmN KS2 [Streptomyces albus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q70LM4 | 0.0 | 202 | 4173 | 141 | 3674 | Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1 |
| Q70LM5 | 0.0 | 82 | 4098 | 2611 | 6218 | Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1 |
| Q70LM6 | 0.0 | 82 | 4089 | 12 | 3609 | Linear gramicidin synthase subunit B OS=Brevibacillus parabrevis OX=54914 GN=lgrB PE=1 SV=1 |
| Q9R9J0 | 0.0 | 275 | 4092 | 35 | 3872 | Mycosubtilin synthase subunit B OS=Bacillus subtilis OX=1423 GN=mycB PE=3 SV=1 |
| O68008 | 3.24e-293 | 78 | 4096 | 2545 | 6122 | Bacitracin synthase 3 OS=Bacillus licheniformis OX=1402 GN=bacC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000052 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |