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CAZyme Information: MGYG000002520_04116

You are here: Home > Sequence: MGYG000002520_04116

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pluralibacter gergoviae
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pluralibacter; Pluralibacter gergoviae
CAZyme ID MGYG000002520_04116
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
333 MGYG000002520_1|CGC54 38500.71 9.614
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002520 5408082 Isolate United States North America
Gene Location Start: 4469060;  End: 4470061  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002520_04116.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 76 317 4.3e-21 0.6032482598607889

CDD Domains      help

MGYG000002520_04116 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMR39247.1 1.36e-244 1 333 1 333
QYD23130.1 4.08e-81 7 325 11 329
AWF36588.1 1.45e-80 2 330 5 328
BAT24250.1 2.79e-79 21 330 52 357
BBV59962.1 1.86e-78 24 330 49 351

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 2.28e-19 22 319 105 403
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000269 0.999093 0.000167 0.000157 0.000143 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002520_04116.