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CAZyme Information: MGYG000002525_01823

You are here: Home > Sequence: MGYG000002525_01823

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Yersinia intermedia
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia intermedia
CAZyme ID MGYG000002525_01823
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
443 MGYG000002525_6|CGC2 50691.81 6.4499
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002525 5023222 Isolate Finland Europe
Gene Location Start: 69371;  End: 70702  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002525_01823.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 47 442 1.7e-96 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 3.87e-114 48 442 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 2.58e-63 1 304 1 280
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AJJ18698.1 0.0 1 443 1 443
AVL37278.1 0.0 1 443 1 443
ARB83508.1 0.0 1 443 1 443
QGR68968.1 0.0 1 443 1 443
QGR67964.1 0.0 1 443 1 443

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4JJA_A 1.98e-63 28 309 6 262
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]
4K05_A 4.44e-30 42 222 28 200
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 3.15e-51 38 442 48 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000588 0.998684 0.000223 0.000166 0.000155 0.000151

TMHMM  Annotations      download full data without filtering help

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