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CAZyme Information: MGYG000002525_03207

You are here: Home > Sequence: MGYG000002525_03207

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Yersinia intermedia
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia intermedia
CAZyme ID MGYG000002525_03207
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
356 MGYG000002525_12|CGC4 41563.4 5.859
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002525 5023222 Isolate Finland Europe
Gene Location Start: 130490;  End: 131560  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002525_03207.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 30 312 3.6e-114 0.9963636363636363

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3934 COG3934 0.002 17 172 2 148
Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VDZ56174.1 2.57e-281 1 356 1 356
AVI44530.1 7.10e-281 2 356 1 355
AVL38273.1 7.10e-281 2 356 1 355
QGR68601.1 1.43e-280 2 356 1 355
QGR73062.1 1.43e-280 2 356 1 355

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000043 0.000021 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002525_03207.