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CAZyme Information: MGYG000002527_01684
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aeromonas caviae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Aeromonadaceae; Aeromonas; Aeromonas caviae | |||||||||||
| CAZyme ID | MGYG000002527_01684 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 110212; End: 111351 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 7 | 362 | 2.7e-135 | 0.9943502824858758 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 0.0 | 4 | 364 | 1 | 362 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 1.05e-175 | 4 | 364 | 1 | 365 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| TIGR00215 | lpxB | 1.95e-157 | 7 | 364 | 8 | 372 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| pfam02684 | LpxB | 2.28e-151 | 7 | 364 | 1 | 365 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| PRK01021 | lpxB | 2.78e-48 | 9 | 344 | 231 | 567 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXB05927.1 | 1.61e-273 | 1 | 379 | 1 | 379 |
| QDO76713.1 | 1.61e-273 | 1 | 379 | 1 | 379 |
| BBR09535.1 | 1.61e-273 | 1 | 379 | 1 | 379 |
| BDA12663.1 | 1.61e-273 | 1 | 379 | 1 | 379 |
| QQM76295.1 | 1.61e-273 | 1 | 379 | 1 | 379 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 2.86e-150 | 4 | 378 | 6 | 382 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 5.76e-150 | 4 | 378 | 6 | 382 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A0KHH6 | 2.90e-245 | 1 | 379 | 1 | 379 | Lipid-A-disaccharide synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=lpxB PE=3 SV=1 |
| Q6LN37 | 3.06e-168 | 1 | 379 | 1 | 379 | Lipid-A-disaccharide synthase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lpxB PE=3 SV=1 |
| C3LQ19 | 6.14e-163 | 1 | 379 | 1 | 379 | Lipid-A-disaccharide synthase OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=lpxB PE=3 SV=1 |
| A5F627 | 6.14e-163 | 1 | 379 | 1 | 379 | Lipid-A-disaccharide synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lpxB PE=3 SV=1 |
| Q9KPW5 | 6.14e-163 | 1 | 379 | 1 | 379 | Lipid-A-disaccharide synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000079 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |