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CAZyme Information: MGYG000002530_01258
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminiclostridium_E siraeum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminiclostridium_E; Ruminiclostridium_E siraeum | |||||||||||
| CAZyme ID | MGYG000002530_01258 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1332003; End: 1339799 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.34e-55 | 1306 | 1840 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 2.36e-24 | 1985 | 2174 | 441 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| cd18793 | SF2_C_SNF | 1.91e-08 | 2229 | 2322 | 41 | 135 | C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC. |
| COG0553 | HepA | 6.53e-08 | 1729 | 2351 | 286 | 848 | Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]. |
| COG0286 | HsdM | 1.24e-07 | 1084 | 1280 | 155 | 375 | Type I restriction-modification system, DNA methylase subunit [Defense mechanisms]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 7.71e-307 | 1016 | 2572 | 1558 | 3186 |
| QIW86704.1 | 6.16e-305 | 1016 | 2572 | 1626 | 3254 |
| QIW86628.1 | 6.16e-305 | 1016 | 2572 | 1626 | 3254 |
| AEY69616.1 | 6.07e-291 | 1016 | 2572 | 1699 | 3330 |
| AXF51455.1 | 4.07e-290 | 1016 | 2572 | 1792 | 3423 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 6.71e-29 | 1018 | 2406 | 44 | 1608 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000082 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |